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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lusD_

Fold library idPDB HeaderMoleculeTitle
c4lusD_PDB header: isomeraseChain: D: PDB Molecule: alanine racemase;PDBTitle: alanine racemase [clostridium difficile 630]


Added to library: Sat Jun 7 08:26:20 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KITVPTWAEINLDNLRFNLNNIKNLLEEDIKICGVIADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIEL
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Known secondary structure (DSSP)


SSTTS
TTS

TTTTT
TT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVIDSGMTRIGFQPNE
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Known secondary structure (DSSP) TT

S

S


GGGTT


T





SS
SSS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGIAIKHVSNSAAIMDCPD
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Known secondary structure (DSSP)
TT


SSTTSS

T






GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRLNMVRAGIILYGHYPSDDVFKDRLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIG
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Known secondary structure (DSSP) G
SS
GGGGT

S
TTS
GGG








TT
TGGG

SS
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence YADGFTRIQKNPKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKDLGTINY
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Known secondary structure (DSSP) GGGT

TT
SS
TT
S


SS


SS



TT
SBTTB
TS
 .........360.........370........
Sequence EVLCMISRRVDRVYMENNELVQINSYLL
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Known secondary structure (DSSP) T

TTSTT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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