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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lqrA_

Fold library idPDB HeaderMoleculeTitle
c4lqrA_PDB header: sugar binding proteinChain: A: PDB Molecule: glycosyl hydrolase, family 31/fibronectin type iii domainPDBTitle: structure of cbm32-3 from a family 31 glycoside hydrolase from2 clostridium perfringens


Added to library: Sat Jul 26 08:29:51 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKKAGSEFALDSSKLEAIYATSEADRDYKENAVDGDENTIWHSAYQAADKLPVSITIKLDKAYDLNQIDY
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Known secondary structure (DSSP)


TTGGGB

GGGS


TT

GGGGGSS
TT




STT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPRQNSRNGHVTEYKIETSLDNENWTEVRTGNLEVNEAGNALANRGYNPIRFNTINAQYLRFTALKTLGD
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Known secondary structure (DSSP)

SS

TT
SSSSS


B
TTSSSBS

S

SS
 .........150......
Sequence TNNKYASAAELVFYGK
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Known secondary structure (DSSP) SSSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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