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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lqlF_

Fold library idPDB HeaderMoleculeTitle
c4lqlF_PDB header: isomeraseChain: F: PDB Molecule: l-arabinose isomerase;PDBTitle: crystal structure of l-arabinose isomerase from lactobacillus2 fermentum cgmcc2921


Added to library: Sat Jul 26 08:21:32 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRKMQDYKFWFVVGSQPLYGPEALAEVEKDARKLVDGLNKGGKLDYPVEFKLVATTADSITKFMKEANYN
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Known secondary structure (DSSP)

STTS

B

GGG
TTTTTTTTT

SS

B



B
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DDVAGVITWMHTFSPAKNWIRGTELLQKPLLHLATQFLNNIPFDSIDMDYMNLHQSAHGDREYAYINSRL
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Known secondary structure (DSSP) TT

SS


GGGT

S


SSSS

TTT

TTTTSSS

TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVPAASVYGWWGDADVQEQIADWQHVAVAYNESFHIKIARFGDTMRDVAVTEGDKVAAQIKLGWTVDYYP
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Known secondary structure (DSSP) T


S
TTSTTTTTT
S
S
TT
STT


S


 .........220.........230.........240.........250.........260.........270.........280
Sequence TNELVAVVNGIAEDEIDAAYKDLEANYDLVEGDNDHEKYVHNVRYQLREYLGIKKFLDDNGYDAFTDNFQ
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Known secondary structure (DSSP) TT

TTTTTTTS


TTTSTT
SS
TTTTTSTTSTTTSTTTT
S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLEGLEQLPGLAVQLLMIDGYGFGPEGDFKMAGLTRLLKIAADNKQTALMEDYTLDLRHGHEAIMGSHML
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Known secondary structure (DSSP)

TT
SS
SSGGGTTTTTTT
TTS
TTSSS
TT




SS



SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EVDPTLASDKPRVEVHPLGIGGKDDPARLVFTGAEGKGYDITLSYFDDGYKFIGYPVDCKTPEAEMPKLP
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Known secondary structure (DSSP)


TTS
S



B

S


SSSSS


B







SS



SS

TT
S
 .........430.........440.........450.........460.........470....
Sequence VAKQMWTPEIGLAEGAKQWMKYGGGHHTVLTLALSEEQLEQLARLFKVDFINIK
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Known secondary structure (DSSP) S



TT
SS

S
SS

TTTSTTT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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