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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ln5A_

Fold library idPDB HeaderMoleculeTitle
c4ln5A_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 burkholderia ambifaria (bamb_6123), target efi-510059, with bound3 glycerol and chloride ion


Added to library: Sat Aug 17 08:26:51 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVFRSADVHGDSFPTNMAVKFMGDELSKLTGGKDSIKVFGNSALGSEKDTVDQVRIGAIDMARVNGASFN
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Known secondary structure (DSSP)

SS
TTSTTTTS

TTTT

TSSSGGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EIVPESLIPSFPFLFRDVDHFRKAMYGPAGQKILDAFAAKGMIALTFYESGARSIYAKRPVRTPADMKGL
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Known secondary structure (DSSP) TT
GGGGGGGSTT


STSTTGGGT



SS

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVRVQPSDLMVDEIRAMGGTPTPMPFAEVYTGLKTGLVDAAENNLPSYEETKHFEVAPDYSETQHAMTPE
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Known secondary structure (DSSP)
S
T


GGGTS
S
TT




 .........220.........230.........240.........250.........260.........270.........280
Sequence VLVFSKKIWDTLSPQEQAAIRKAAADSVPYYQKLWTAREASAQQAVTKGGANILPAAQVDRAAFVKAMQP
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Known secondary structure (DSSP) TTS
TT

GGGS
T
 .........290.........300..
Sequence LWTKYEKTPQMKQIVDEIEATK
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Known secondary structure (DSSP)

ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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