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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lmoB_

Fold library idPDB HeaderMoleculeTitle
c4lmoB_PDB header: rna binding proteinChain: B: PDB Molecule: telomerase reverse transcriptase;PDBTitle: structure of a vertebrate rna binding domain of telomerase (trbd)


Added to library: Sat Oct 12 08:28:44 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQSFMRTLGFLYGGRGMRSFLLNRKKKTAEGFRKIQGRDLIRIVFFEGVLYLNGLERKPKKLPRRFFNMV
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Known secondary structure (DSSP)


S
GGGSGGG


SSS


SS
GGGGGT


S
SS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PLFSQLLRQHRRCPYSRLLQKTCPLVGIKDAGQAELSSFLPQHCGSHRVYLFVRECLLAVIPQELWGSEH
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Known secondary structure (DSSP)

TTS

SSSSS
SS

GGGTTT

B
S
GGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRLLYFARVRFFLRSGKFERLSVAELMWKIKVNNCDWLKISKTGRVPPSELSYRTQILGQFLAWLLDGFV
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Known secondary structure (DSSP) TSTT





STT

GGG
GGG
S
SSS


TT
 .........220.........230.........240.........250.
Sequence VGLVRACFYATESMGQKNAIRFYRQEVWAKLQDLAFRSHIS
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Known secondary structure (DSSP) S
SSS
S

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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