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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lltB_

Fold library idPDB HeaderMoleculeTitle
c4lltB_PDB header: transferaseChain: B: PDB Molecule: geranyltranstransferase;PDBTitle: crystal structure of a farnesyl diphosphate synthase from roseobacter2 denitrificans och 114, target efi-509393, with two ipp and calcium3 bound in active site


Added to library: Sat Jul 27 08:42:11 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMFTQRLDAAAAAVQAHFDKVLAAFEPLPIVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWSATAI
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Known secondary structure (DSSP)
TS


S
S

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALS
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Known secondary structure (DSSP) TSTTTT

STT
S
SGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTAALKRYAQALG
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Known secondary structure (DSSP) STTTT
SS


TTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence LAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMSLIDEACDSLATYGAKADTLRE
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Known secondary structure (DSSP)

SS

STT



TGGGGGGG
 .........290
Sequence TARFVVRRTH
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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