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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4llfP_

Fold library idPDB HeaderMoleculeTitle
c4llfP_PDB header: virusChain: P: PDB Molecule: capsid protein;PDBTitle: crystal structure of cucumber necrosis virus


Added to library: Sat Nov 2 08:29:23 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IAHPQAFPGAIAAPISYAYAVKGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPL
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Known secondary structure (DSSP)


TT

TT




S











SSS
TTS
TTTT
S
TTSB

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NPFLFPWLVNIAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPW
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Known secondary structure (DSSP)
TTT
TTTT
S
TT

SSSTT




STT
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPTAELGDIFVEYTVDLFEAQPTSPLLESLFR
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Known secondary structure (DSSP) S




S




S
SS



SS
S
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence ESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAGSS
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Known secondary structure (DSSP)
SSS



S

SS
SS

SS


SS
SS
 .........290.........300.........310.........320.
Sequence AYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV
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Known secondary structure (DSSP)
TT
S

S


TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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