PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4lisA_

Fold library id	PDB Header	Molecule	Title
c4lisA_	PDB header: isomerase	Chain: A: PDB Molecule: udp-glucose 4-epimerase;	PDBTitle: crystal structure of udp-galactose-4-epimerase from aspergillus2 nidulans

Links to external resources
Added to library: Sat Oct 26 10:32:16 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P S G S V L V T G G T G Y I G S F T T L A L L E A G Y K V V V A D N L Y N S S A E A L N R I E L I S G K K A E F A Q L D V T D E A A F D K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T
S S S
T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F E A H P D I D S V I H F A A L K A V G E S G E K P L D Y Y H V N V Y G T I C L L R S M V R H N V T N I V F S S S A T V Y G D A T R F P D M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T
T T
G G G G
S T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I P I P E H C P L G P T N P Y G N T K F A I E L A I T D V I N A Q R N N A K K A G N E T E A A K W N G A L L R Y F N P A G A H P S G I M G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
T T S
S S T T
T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D P Q G V P Y N L L P L L A Q V A T G K R E K L L V F G D D Y A S H D G T A I R D Y I H I L D L A D G H L K A L N Y L R A N N P G V R A W N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T S S S
S
S S S S S S S
T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L G T G R G S T V Y E M I R A F S K A V G R D L P Y E V A P R R A G D V L N L T S N P T R A N T E L G W K A Q R T L E Q A C E D L W L W T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
S
B
T T T
S

. . . . . . . . . 360 . . . .

Sequence N N P Q G Y R Q Q P P A E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	S	G	S	V	L	V	T	G	G	T	G	Y	I	G	S	F	T	T	L	A	L	L	E	A	G	Y	K	V	V	V	A	D	N	L	Y	N	S	S	A	E	A	L	N	R	I	E	L	I	S	G	K	K	A	E	F	A	Q	L	D	V	T	D	E	A	A	F	D	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	S														T										S	S	S		T											S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	E	A	H	P	D	I	D	S	V	I	H	F	A	A	L	K	A	V	G	E	S	G	E	K	P	L	D	Y	Y	H	V	N	V	Y	G	T	I	C	L	L	R	S	M	V	R	H	N	V	T	N	I	V	F	S	S	S	A	T	V	Y	G	D	A	T	R	F	P	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T									S								T	T									T															T										G	G	G	G			S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	P	I	P	E	H	C	P	L	G	P	T	N	P	Y	G	N	T	K	F	A	I	E	L	A	I	T	D	V	I	N	A	Q	R	N	N	A	K	K	A	G	N	E	T	E	A	A	K	W	N	G	A	L	L	R	Y	F	N	P	A	G	A	H	P	S	G	I	M	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B		T	T	S					S	S																											T	T																							T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	P	Q	G	V	P	Y	N	L	L	P	L	L	A	Q	V	A	T	G	K	R	E	K	L	L	V	F	G	D	D	Y	A	S	H	D	G	T	A	I	R	D	Y	I	H	I	L	D	L	A	D	G	H	L	K	A	L	N	Y	L	R	A	N	N	P	G	V	R	A	W	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S				S											T	S	S	S							S		S	S	S	S	S	S	S																									T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	G	T	G	R	G	S	T	V	Y	E	M	I	R	A	F	S	K	A	V	G	R	D	L	P	Y	E	V	A	P	R	R	A	G	D	V	L	N	L	T	S	N	P	T	R	A	N	T	E	L	G	W	K	A	Q	R	T	L	E	Q	A	C	E	D	L	W	L	W	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																	S	S											T	T			S				B		T						T	T						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Sequence	N	N	P	Q	G	Y	R	Q	Q	P	P	A	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	G	G	G	S