Fold library entry viewer: c4lgnA_

Added to library: Sat Jan 11 09:43:28 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	Q	P	Y	T	W	S	N	V	A	I	G	G	G	G	F	V	D	G	I	V	F	N	E	G	A	P	G	I	L	Y	V	R	T	D	I	G	G	M	Y	R	W	D	A	A	N	G	R	W	I	P	L	L	D	W	V	G	W	N	N	W	G	Y	N	G	V	V	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B									S			B		S									S	S	S	T	T							S	S	S							T	T	T	T					S		T	T			S	T	T	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	D	P	I	N	T	N	K	V	W	A	A	V	G	M	Y	T	N	S	W	D	P	N	D	G	A	I	L	R	S	S	D	Q	G	A	T	W	Q	I	T	P	L	P	F	K	L	G	G	N	M	P	G	R	G	M	G	E	R	L	A	V	D	P	N	N	D	N	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	T	T										S	S	T	T	S		S								S	S	T	T	S	S							S	S				T	T	S	T	T	T	T	S								T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	F	G	A	P	S	G	K	G	L	W	R	S	T	D	S	G	A	T	W	S	Q	M	T	N	F	P	D	V	G	T	Y	I	A	N	P	T	D	T	T	G	Y	Q	S	D	I	Q	G	V	V	W	V	A	F	D	K	S	S	S	S	L	G	Q	A	S	K	T	I	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T							S	S	T	T	S	S					T	T		S						B	S		T	T		T	T	S	S	S		S	B										G	G	G	S		T	T	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	V	A	D	P	N	N	P	V	F	W	S	R	D	G	G	A	T	W	Q	A	V	P	G	A	P	T	G	F	I	P	H	K	G	V	F	D	P	V	N	H	V	L	Y	I	A	T	S	N	T	G	G	P	Y	D	G	S	S	G	D	V	W	K	F	S	V	T	S	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		T	T							S	S	S	S	S	S					T	T				S	S									T	T	T	T								S	S			S	S												T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	T	R	I	S	P	V	P	S	T	D	T	A	N	D	Y	F	G	Y	S	G	L	T	I	D	R	Q	H	P	N	T	I	M	V	A	T	Q	I	S	W	W	P	D	T	I	I	F	R	S	T	D	G	G	A	T	W	T	R	I	W	D	W	T	S	Y	P	N	R	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		T	T		T	T	T												S	S	S	T	T								T			S	S								S	S	T	T	S	S				S				S	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	Y	V	L	D	I	S	A	E	P	W	L	T	F	G	V	Q	P	N	P	P	V	P	S	P	K	L	G	W	M	D	E	A	M	A	I	D	P	F	N	S	D	R	M	L	Y	G	T	G	A	T	L	Y	A	T	N	D	L	T	K	W	D	S	G	G	Q	I	H	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T	T	S	G	G	G	G	T	T				B	T	T	B		S	S		S		S									T	T		T	T							S	S						S		G	G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	M	V	K	G	L	E	E	T	A	V	N	D	L	I	S	P	P	S	G	A	P	L	I	S	A	L	G	D	L	G	G	F	T	H	A	D	V	T	A	V	P	S	T	I	F	T	S	P	V	F	T	T	G	T	S	V	D	Y	A	E	L	N	P	S	I	I	V	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		B			B								S	S	S		S						T	T	T						S		T	T	S			S					S	S			S									T	T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	S	F	D	P	S	S	Q	P	N	D	R	H	V	A	F	S	T	D	G	G	K	N	W	F	Q	G	S	E	P	G	G	V	T	T	G	G	T	V	A	A	S	A	D	G	S	R	F	V	W	A	P	G	D	P	G	Q	P	V	V	Y	A	V	G	F	G	N	S	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G		T	T			S					S	S	T	T	S	S		B						T	T			S								T	T	S	S							S	S	T	T							S	S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	S	Q	G	V	P	A	N	A	Q	I	R	S	D	R	V	N	P	K	T	F	Y	A	L	S	N	G	T	F	Y	R	S	T	D	G	G	V	T	F	Q	P	V	A	A	G	L	P	S	S	G	A	V	G	V	M	F	H	A	V	P	G	K	E	G	D	L	W	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T	S		T	T							S	S		T	T							T	T						S	S	T	T	S	B							S						T	T	S							T	T		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	S	G	L	Y	H	S	T	N	G	G	S	S	W	S	A	I	T	G	V	S	S	A	V	N	V	G	F	G	K	S	A	P	G	S	S	Y	P	A	V	F	V	V	G	T	I	G	G	V	T	G	A	Y	R	S	D	D	G	G	T	T	W	V	R	I	N	D	D	Q	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S	S	T	T	S	S					T	T														T	T			S										T	T								S	S	T	T	S	S							T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Sequence	Q	Y	G	N	W	G	Q	A	I	T	G	D	P	R	I	Y	G	R	V	Y	I	G	T	N	G	R	G	I	V	Y	G	D	I	A	G	A	P	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S	S					T	T										B	S	S									S

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PDB structure

FASTA sequence

Hidden Markov model

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