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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lejA_

Fold library idPDB HeaderMoleculeTitle
c4lejA_PDB header: allergen, plant proteinChain: A: PDB Molecule: vicilin;PDBTitle: crystal structure of the korean pine (pinus koraiensis) vicilin


Added to library: Sat Jan 25 08:17:42 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPYVFHSDRFRIRASSEAGEIRALPNFGEVSELLEGISRYRVTCIEMKPNTVMLPHYIDAKWILYVTGGR
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Known secondary structure (DSSP)

S
GGG

SS



GGGGGGTT
SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYIAYVQQNELVKRKLEEGDVFGVPSGHTFYLVNNDDHNSLRIASLLRTESTMRGEYEPFYVAGGRNPET
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Known secondary structure (DSSP) TTTT
TT



SS


SSSTT


SS
SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence VYSAFSDDVLEAAFNTDVQKLEHIFGAHRRGVIFYASEQPKPFNLRNQKPDFENDNGRFTRAGPKDNPFL
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Known secondary structure (DSSP) GGGGS
TS
TTSSS

S
S


S




STT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DSVDVTVGFGVLNPGTMTAPSHNTKATSIAIVMEGEGRIEMACPHLQDINYERVRARLRTGTVYVVPAGH
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Known secondary structure (DSSP) T
TT
SSS


S







TT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PITEIASTNGRLEILWFDINTSGNEREFLAGKNNVLQTLEKEVRHLSFNIPRGEEIEEVLQAQKDQVILR
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Known secondary structure (DSSP)

SSS
S
TT

SSSTT
GGGTS
T
TTSTTS



S
 .....
Sequence GPQRQ
Predicted secondary structure




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Known secondary structure (DSSP)
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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