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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ldsB_

Fold library idPDB HeaderMoleculeTitle
c4ldsB_PDB header: transport protein, membrane proteinChain: B: PDB Molecule: bicyclomycin resistance protein tcab;PDBTitle: the inward-facing structure of the glucose transporter from2 staphylococcus epidermidis


Added to library: Sat Oct 19 09:17:44 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LIFILGALGGLLYGYDNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVM
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Known secondary structure (DSSP)
TTTGGGG



ST
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILA
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Known secondary structure (DSSP) TTS

SS
GGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKE
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Known secondary structure (DSSP) S
SGGGTTTT

S
T
TS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MKEINAISESTWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTI
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Known secondary structure (DSSP) GGG
SSTTS
TTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVL
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Known secondary structure (DSSP) TT
SSTT
TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEWVFLIFAFIGVLAMIFVIKFLPETR
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Known secondary structure (DSSP) S
TT

SSSS

STSS


 .
Sequence G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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