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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4l8kB_

Fold library idPDB HeaderMoleculeTitle
c4l8kB_PDB header: hydrolaseChain: B: PDB Molecule: putative peptidase;PDBTitle: crystal structure of a putative peptidase (parmer_02772) from2 parabacteroides merdae atcc 43184 at 2.26 a resolution


Added to library: Sat Jul 6 08:30:01 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSSPRDNFEALWRIXDENYCFFAFKDVDWDDVYDRYNLLVKDTXNQYELFDILGKXLAEVKDGHTNLISS
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Known secondary structure (DSSP)



S
GGG
SS


TT

GGG

TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FDXSRYWAWYEDYPANFYKEIQDNYLGTDYKIAGGXKYKRLADDQIGYVYYGSFSSGVGENNLDYXFAHF
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Known secondary structure (DSSP) S
B


TTS





SS
TTTTTT

BTS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence KECKGLIFDVRDNGGGSXLYSDRIASRFLEERILTGYTQYKKGNGHNDFTQPNPVYLSPSDRTRWLRPVI
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Known secondary structure (DSSP) TT
S
TT


B
GGG
SS


B
SSSTT
B





SS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLTNRHSYSATNDFVNVXRLLPQVTVXGDRTGGGSGLPFSSELPNGWSVRFSACPVLDVNKQHTEFGIDP
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Known secondary structure (DSSP)
TT
BTTTSTTS


B

S

TTS

S

TTS
B
TT



 .........290.........300.........310.....
Sequence DTAVAITGEDIXKGRDTIIEAAIGLLLAKGDSAIS
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Known secondary structure (DSSP) S



TT



SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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