Fold library entry viewer: c4l3tB_

Added to library: Sat Jul 6 08:42:28 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	A	C	E	R	A	L	Q	Y	L	G	D	K	I	H	G	F	T	V	N	Q	V	T	S	V	P	E	L	F	L	T	A	V	L	T	H	D	D	T	G	A	R	Y	L	H	L	A	R	E	D	T	N	N	L	F	S	V	Q	F	R	T	T	P	M	D	S	T	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							T	T										G	G	G	T								T	T	T										S		S	S												S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	H	I	L	Q	H	T	V	L	G	S	Q	Y	P	C	R	D	P	F	F	K	M	L	N	R	S	L	S	T	F	M	N	A	F	T	A	S	D	Y	T	L	Y	P	F	S	T	Q	N	P	K	D	F	Q	N	L	L	S	V	Y	L	D	A	T	F	F	P	L	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S							T	T	S				S								S	S									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	F	W	Q	E	G	W	R	L	E	H	E	N	P	S	D	P	Q	T	P	L	V	F	G	V	V	F	N	E	M	K	G	A	F	T	D	N	E	R	I	F	S	Q	H	L	Q	N	R	L	L	P	D	H	T	Y	S	V	V	S	G	G	D	P	L	C	I	P	E	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S						S	S	T	T		T	T	S															T	T	S														S	T	T	S	G	G	G	S		T	T			T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	E	Q	L	Q	F	H	A	T	H	Y	H	P	S	N	A	R	F	F	T	Y	G	N	F	P	L	E	Q	H	L	Q	I	H	E	E	A	L	S	F	Q	I	E	P	S	T	V	V	P	A	Q	T	P	W	D	K	P	R	E	F	Q	I	T	G	P	D	Q	T	T	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									S	G	G	G								S	S												T	T							S										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	S	F	L	L	P	D	I	T	D	T	F	E	A	F	T	L	S	L	L	S	S	L	L	T	S	G	P	N	S	P	F	Y	A	L	I	E	S	G	L	G	T	D	F	S	P	D	V	G	Y	N	G	Y	T	R	E	A	Y	F	S	V	G	L	Q	G	I	V	E	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																S	S	T	T	S	S					G	G	G	T	S		S				T	T						S	S	S													G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	E	T	V	R	S	L	I	D	R	T	I	D	E	V	V	E	K	G	F	E	D	D	R	I	E	A	L	L	H	I	E	I	Q	M	K	H	Q	S	T	S	F	G	L	M	L	T	S	Y	I	A	S	C	W	N	H	D	G	D	P	V	E	L	L	L	G	N	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																								T	T															T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	R	Q	L	Q	E	N	P	K	F	L	Q	E	V	Q	Y	F	N	N	Q	H	L	T	L	S	M	R	P	D	D	K	Y	H	E	Q	A	Q	V	E	A	T	K	L	K	Q	V	E	A	L	S	P	G	D	R	Q	Q	I	Y	E	G	L	E	L	R	S	Q	Q	S	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		T	T	T	T	T																		T	T	S															T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	A	S	L	P	A	L	K	V	S	D	I	E	P	T	I	P	V	T	E	L	D	V	V	L	T	A	G	D	I	P	V	Q	Y	C	A	Q	P	T	N	G	M	V	Y	F	R	A	F	S	S	L	N	T	L	P	E	E	L	R	P	Y	V	P	L	F	C	S	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	S		S	S												T	T	T											S	S											T	T	S		G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	G	C	G	L	L	D	Y	R	E	Q	A	Q	Q	I	E	L	T	G	G	M	S	A	S	P	H	V	L	P	D	D	S	H	M	D	T	Y	E	Q	G	V	L	F	S	S	L	C	L	D	R	N	L	P	D	M	M	Q	L	W	S	E	I	F	N	N	P	F	E	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T	T	B																									S	S		T	T														G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	H	F	K	V	L	V	M	T	A	Q	E	L	A	N	G	I	P	D	S	G	H	L	Y	A	S	I	R	A	G	R	T	L	T	P	A	G	D	L	Q	E	T	F	S	G	M	D	Q	V	R	L	M	R	I	A	E	M	T	D	I	P	I	L	R	L	P	R	I	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	G	G	G											T	T	T												S									G	G	G		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	L	N	G	D	N	M	R	C	S	V	N	A	T	P	Q	Q	M	P	Q	T	E	K	A	V	E	D	F	L	R	S	I	G	R	S	P	V	R	H	T	V	E	K	P	V	I	R	K	L	V	M	E	P	T	F	K	P	W	Q	M	T	H	F	L	M	P	F	P	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	S									T	T	T															S																					T	T														S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	V	G	E	C	I	R	T	V	P	Y	T	D	P	D	H	A	S	L	I	L	A	R	L	M	T	A	K	F	L	H	T	E	I	R	E	G	G	A	Y	G	G	G	A	L	S	H	N	G	I	F	T	L	Y	S	Y	R	D	P	N	T	I	E	T	L	Q	S	F	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S																T						T					S							T	T											S		S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	D	W	A	S	G	F	T	Q	Q	D	I	D	E	A	L	S	V	F	S	T	V	D	A	P	V	A	P	S	D	G	M	D	H	F	L	Y	G	L	S	D	E	M	Q	A	H	R	E	Q	L	F	A	V	S	H	D	L	L	A	V	S	D	R	Y	L	G	T	G	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																				T					T	T												S																								T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Sequence	H	G	L	A	I	L	G	P	E	N	P	K	I	A	K	D	P	S	W	I	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S							T		T	T			B

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PDB structure

FASTA sequence

Hidden Markov model

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