Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4l3fG_

Fold library idPDB HeaderMoleculeTitle
c4l3fG_PDB header: cell invasionChain: G: PDB Molecule: internalin k;PDBTitle: crystal structure of internalin k (inlk) from listeria monocytogenes


Added to library: Sat Aug 31 08:49:06 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNVNIPDSTFKAYLNGLLGQASTANITEAQMDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYN
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)






T

TT





S


S

TTGGG
TT
SS


S

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence QISGLSNLERLRIMGADVTSDKIPNLSGLTNLTLLDLSHSAHDDSILTKINTLPKVTSIDLSYNGAITDI
Predicted secondary structure


























































SS confidence





































































Known secondary structure (DSSP) GGTT
TT


TT
BGGGS


TT
TT



SSB
BTTTT
SS


TT
TB



 .........150.........160.........170.........180.........190.........200.........210
Sequence MPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFS
Predicted secondary structure























































SS confidence





































































Known secondary structure (DSSP) GGGGG
SS


TTS


B
TTGGGSSS



S
TSSS


GGGSTTTTGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDL
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP) G
TT

B
TT




B



STTTTT

GGGTT
S

S

B

 .........290.........300.........310.
Sequence SYQSYNTPEQFQNGGSYTISMPIYDHYFTVD
Predicted secondary structure



















SS confidence






























Known secondary structure (DSSP)
GGGS


GGGSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D