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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4l1fB_

Fold library idPDB HeaderMoleculeTitle
c4l1fB_PDB header: electron transportChain: B: PDB Molecule: acyl-coa dehydrogenase domain protein;PDBTitle: electron transferring flavoprotein of acidaminococcus fermentans:2 towards a mechanism of flavin-based electron bifurcation


Added to library: Sat Jan 18 08:49:38 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDFNLTEDQQMIKDMAAEFAEKFLAPTVEERDKAHIWDRKLIDKMGEAGFCGICFPEEYGGMGLDVLSYI
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Known secondary structure (DSSP)


S

TTTTT


TGGGTTS
GGGTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence LAVEELSKVDDGTGITLSANVSLCATPIYMFGTEEQKQKYLAPIAEGTHVGAFGLTEPSAGTDASAQQTT
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Known secondary structure (DSSP) TT
TT

TTS



BTTBSSSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence AVLKGDKYILNGSKIFITNGKEADTYVVFAMTDKSQGVHGISAFILEKGMPGFRFGKIEDKMGGHTSITA
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Known secondary structure (DSSP) TTTTTT
SS
GGGGGGGTT
TT


SS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELIFEDCEVPKENLLGKEGEGFKIAMETLDGGRIGVAAQALGIAEGALAAAVKYSKEREQFGRSISKFQA
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Known secondary structure (DSSP) GGGSSTT

TTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LQFMMADMATKIEAARYLVYHAAMLKNEGKPYSEAAAMAKCFASDVAMEVTTDAVQIFGGYGYTVDYPAE
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Known secondary structure (DSSP) T


GGGGGSTTSS
 .........360.........370.........380
Sequence RYMRNAKITQIYEGTNQVMRIVTSRALLRD
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Known secondary structure (DSSP) TTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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