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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4l0zA_ | PDB header: transcription/dna | Chain: A: PDB Molecule: runt-related transcription factor 1; | PDBTitle: crystal structure of runx1 and ets1 bound to tcr alpha promoter2 (crystal form 2) |
Added to library: Sat Mar 29 08:16:01 2014 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | V | L | A | D | H | P | G | E | L | V | R | T | D | S | P | N | F | L | C | S | V | L | P | T | H | W | R | C | N | K | T | L | P | I | A | F | K | V | V | A | L | G | D | V | P | D | G | T | L | V | T | V | M | A | G | N | D | E | N | Y | S | A | E | L | R | N | A | T | A | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | S | T | T | S | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | M | K | N | Q | V | A | R | F | N | D | L | R | F | V | G | R | S | G | R | G | K | S | F | T | L | T | I | T | V | F | T | N | P | P | Q | V | A | T | Y | H | R | A | I | K | I | T | V | D | G | P | R | E | P | R | G | S | L | S | F | S | E | R | L | S | E | L | E | Q | L | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() |   | . | . | . | . | . | . | . | |||||||||||||
Sequence | R | T | A | M | R | V | S | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T |
Download: | PDB structure | FASTA sequence |
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