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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ky0B_

Fold library idPDB HeaderMoleculeTitle
c4ky0B_PDB header: transport protein, membrane proteinChain: B: PDB Molecule: proton/glutamate symporter, sdf family;PDBTitle: crystal structure of a substrate-free glutamate transporter homologue2 from thermococcus kodakarensis


Added to library: Sat Sep 14 08:29:19 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDYPVLWKILWGLVLGAVFGLIAGHFGYAGAVKTYIKPFGDLFVRLLKMLVMPIVLASLVVGAASISPAR
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Known secondary structure (DSSP)




S
TTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGRVGVKIVVYYLATSAMAVFFGLIVGRLFNVGANVNLGSGTPPSLVQTLLNIVPTNPFASLAKGEVLPV
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Known secondary structure (DSSP) T













SSTTS
S
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence IFFAIILGIAITYLMNRNEERVRKSAETLLRVFDGLAEAMYLIVGGVMQYAPIGVFALIAYVMAEQGVRV
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Known secondary structure (DSSP) TSS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGPLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFVTRSSSGTLPVTMRVAEEEMG
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Known secondary structure (DSSP)
TTTT



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDKGIFSFTLPLGATINMDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIML
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Known secondary structure (DSSP) B


TT



TTTTS


TT
 .........360.........370.........380.........390.........400.........410...
Sequence AMVLQSVGLDLTPGSPVALAYAMILGIDAILDMGRTMVNVTGDLAGTVIVAKTEKELDESKWI
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Known secondary structure (DSSP) TT



TTSTTSSS
B

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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