Fold library entry viewer: c4kxfF_

Added to library: Sat Jul 27 09:45:24 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	D	L	N	V	L	A	Q	N	L	K	D	L	Y	N	S	P	A	F	L	N	F	Y	P	L	G	E	D	I	D	I	I	F	N	L	E	K	T	F	T	E	P	I	M	W	K	K	D	H	R	H	H	R	V	E	Q	L	T	L	G	S	L	L	E	A	L	K	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S								S	S		T	T	S						T	T	T	T											T	T	S														T			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	L	I	E	G	E	S	G	K	G	K	S	T	L	L	Q	R	I	A	M	L	W	A	S	G	G	C	R	A	L	K	G	F	R	L	V	F	F	I	H	L	R	S	A	R	G	G	L	F	E	T	L	Y	D	Q	L	L	N	I	P	D	F	I	S	K	P	T	F	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T	S	S														T	T			S	G	G	G	G		S							T	T	S			S													S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	L	K	L	H	K	E	V	L	F	L	L	D	G	Y	N	E	F	H	P	Q	N	C	P	E	I	E	A	L	I	K	E	N	H	R	F	K	N	M	V	I	V	T	T	T	T	E	C	L	R	H	I	R	H	V	G	A	L	T	A	E	V	G	D	M	T	E	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G								G	G	G			T	T	T												T	T	T										G	G	G						T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	D	L	I	E	A	V	L	V	P	D	Q	V	E	R	L	W	A	Q	I	Q	E	S	R	C	L	R	N	L	M	K	T	P	L	F	V	V	I	T	C	A	I	Q	M	G	R	Q	E	F	Q	A	H	T	Q	T	M	L	F	Q	T	F	Y	D	L	L	I	Q	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																						T	T	S															S	S				S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	H	R	Y	R	G	G	A	S	G	D	F	A	R	S	L	D	Y	C	G	D	L	A	L	E	G	V	F	A	H	K	F	D	F	E	P	E	H	G	S	S	M	N	E	D	V	L	V	T	I	G	L	L	C	K	Y	T	A	Q	R	L	K	P	T	Y	K	F	F	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S			T	T																				T								T	T	T	T										T	S						S			S	S						S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	F	Q	E	Y	T	A	G	R	R	L	S	S	L	L	T	S	K	E	P	E	E	V	S	K	G	N	S	Y	L	N	K	M	V	S	I	S	D	I	T	S	L	Y	G	N	L	L	L	Y	T	C	G	S	S	T	E	A	T	R	A	V	M	R	H	L	A	M	V	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T		S	S													T			B							T	S																							T	T			B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	G	S	L	Q	G	L	S	V	T	E	I	Q	S	L	R	N	T	T	E	Q	D	V	L	K	A	I	N	V	N	S	F	V	E	C	G	I	N	L	F	S	E	S	M	S	K	S	D	L	S	Q	E	F	E	A	F	F	Q	G	K	S	L	Y	I	N	S	E	N	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G											S	S																									T		T	T	T	T									T	T							S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	Y	L	F	D	F	F	E	Y	L	P	N	C	A	S	A	L	D	F	V	K	L	D	F	Y	E	R	A	T	P	P	R	A	V	S	L	F	F	N	W	K	Q	E	F	K	T	L	E	V	T	L	R	D	I	N	K	L	N	K	Q	D	I	K	Y	L	G	K	I	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S								S														T													S																	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	A	T	N	L	R	L	H	I	K	R	C	A	A	M	A	G	R	L	S	S	V	L	R	T	C	K	N	M	H	T	L	M	V	E	A	S	P	L	T	T	D	D	E	Q	Y	I	T	S	V	T	G	L	Q	N	L	S	I	H	R	L	H	T	Q	Q	L	P	G	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										S		T	T		S	S						T	S	S		S									S															T	T		S									S				S	S	S	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	D	S	L	G	N	L	K	N	L	E	R	L	I	L	D	D	I	R	M	N	E	E	D	A	K	N	L	A	E	G	L	R	S	L	K	K	M	R	L	L	H	L	T	H	L	S	D	I	G	E	G	M	D	Y	I	V	K	S	L	S	E	E	S	C	D	L	Q	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	G	G	G		S	S		S																						T	T					S						S			S		T	T											S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	L	V	A	C	C	L	T	A	N	S	V	K	V	L	A	Q	N	L	H	N	L	I	K	L	S	I	L	D	I	S	E	N	Y	L	E	K	D	G	N	E	A	L	Q	E	L	I	G	R	L	G	V	L	G	E	L	T	T	L	M	L	P	W	C	W	D	V	H	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S													T	G	G	G			S								S					S	S											T	G	G	G		S	S										T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	P	K	L	L	K	Q	L	E	G	T	P	G	L	A	K	L	G	L	K	N	W	R	L	R	D	E	E	I	K	S	L	G	E	F	L	E	M	N	P	L	R	D	L	Q	Q	L	D	L	A	G	H	C	V	S	S	D	G	W	L	Y	F	M	N	V	F	E	N	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G		T	T							S	S																		S			S									S																T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
Sequence	Q	L	V	F	F	D	F	S	T	E	E	F	L	P	D	A	A	L	V	R	K	L	S	Q	V	L	S	K	L	T	L	L	Q	E	V	K	L	T	G	W	E	F	D	D	Y	D	I	S	A	I	K	G	T	F	K	L	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S	B																		S	S								S	B			S	S	S		G	G	G	G			S	S

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PDB structure

FASTA sequence

Hidden Markov model

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