Fold library entry viewer: c4kxdA_

Added to library: Sat Aug 3 08:42:17 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	C	P	A	S	E	D	E	S	G	Q	W	K	N	F	R	L	P	D	F	V	N	P	V	H	Y	D	L	H	V	K	P	L	L	E	E	D	T	Y	T	G	T	V	S	I	S	I	N	L	S	A	P	T	R	Y	L	W	L	H	L	R	E	T	R	I	T	R	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		B					S	S	G	G	G	S	S	S			T	T														G	G	G	T														S			S								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	K	R	P	S	G	D	Q	V	Q	V	R	R	C	F	E	Y	K	K	Q	E	Y	V	V	V	E	A	E	E	E	L	T	P	S	S	G	D	G	L	Y	L	L	T	M	E	F	A	G	W	L	N	G	S	L	V	G	F	Y	R	T	T	Y	T	E	N	G	R	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S												G	G	G	T							S							S	S	S														S	S		S	S										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	I	A	A	T	D	H	E	P	T	D	A	R	K	S	F	P	C	F	D	E	P	N	K	K	A	T	Y	T	I	S	I	T	H	P	K	E	Y	G	A	L	S	N	M	P	V	A	K	E	E	S	V	D	D	K	W	T	R	T	T	F	E	K	S	V	P	M	S	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T					S		B			S	T	T			B										T	T	S					S	S								S	S	S	S											S	B		G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	V	C	F	A	V	H	Q	F	D	S	V	K	R	I	S	N	S	G	K	P	L	T	I	Y	V	Q	P	E	Q	K	H	T	A	E	Y	A	A	N	I	T	K	S	V	F	D	Y	F	E	E	Y	F	A	M	N	Y	S	L	P	K	L	D	K	I	A	I	P	D	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G																T	T	S									G	G	G	G	G	G	G																		T	T				S	S	S								S	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	A	M	E	N	W	G	L	I	T	Y	R	E	T	N	L	L	Y	D	P	K	E	S	A	S	S	N	Q	Q	R	V	A	T	V	V	A	H	E	L	V	H	Q	W	F	G	N	I	V	T	M	D	W	W	E	D	L	W	L	N	E	G	F	A	S	F	F	E	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					T	T						G	G	G	T				T	T	T	S																					B	T	T	T				S	S	G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	V	N	H	A	E	T	D	W	Q	M	R	D	Q	M	L	L	E	D	V	L	P	V	Q	E	D	D	S	L	M	S	S	H	P	I	I	V	T	V	T	T	P	D	E	I	T	S	V	F	D	G	I	S	Y	S	K	G	S	S	I	L	R	M	L	E	D	W	I	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G										T								T	T	S	T	T				S	S					S							T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	N	F	Q	K	G	C	Q	M	Y	L	E	K	Y	Q	F	K	N	A	K	T	S	D	F	W	A	A	L	E	E	A	S	R	L	P	V	K	E	V	M	D	T	W	T	R	Q	M	G	Y	P	V	L	N	V	N	G	V	K	N	I	T	Q	K	R	F	L	L	D	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	T	T																		S								T	T	T	S	S										T	T	T									S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	N	P	S	Q	P	P	S	D	L	G	Y	T	W	N	I	P	V	K	W	T	E	D	N	I	T	S	S	V	L	F	N	R	S	E	K	E	G	I	T	L	N	S	G	N	A	F	L	K	I	N	P	D	H	I	G	F	Y	R	V	N	Y	E	V	A	T	W	D	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T		S			T	T	T	T											T	T									T	T		T	T									S					S	G	G	G		S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	T	A	L	S	L	N	H	K	T	F	S	S	A	D	R	A	S	L	I	D	D	A	F	A	L	A	R	A	Q	L	L	D	Y	K	V	A	L	N	L	T	K	Y	L	K	R	E	E	N	F	L	P	W	Q	R	V	I	S	A	V	T	Y	I	I	S	M	F	E	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	S																		T	T	S	S								T	T	T	T	G	G	G																					T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	E	L	Y	P	M	I	E	E	Y	F	Q	G	Q	V	K	P	I	A	D	S	L	G	W	N	D	A	G	D	H	V	T	K	L	L	R	S	S	V	L	G	F	A	C	K	M	G	D	R	E	A	L	N	N	A	S	S	L	F	E	Q	W	L	N	G	T	V	S	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																						S	S			S																		T	T																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	N	L	R	L	L	V	Y	R	Y	G	M	Q	N	S	G	N	E	I	S	W	N	Y	T	L	E	Q	Y	Q	K	T	S	L	A	Q	E	K	E	K	L	L	Y	G	L	A	S	V	K	N	V	T	L	L	S	R	Y	L	D	L	L	K	D	T	N	L	I	K	T	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																																											T		S												T	T		T	T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	F	T	V	I	R	Y	I	S	Y	N	S	Y	G	K	N	M	A	W	N	W	I	Q	L	N	W	D	Y	L	V	N	R	Y	T	L	N	N	R	N	L	G	R	I	V	T	I	A	E	P	F	N	T	E	L	Q	L	W	Q	M	E	S	F	F	A	K	Y	P	Q	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	T	T												T										T	T							G	G	G	G	G	T	T			S														S				G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
Sequence	A	G	E	K	P	R	E	Q	V	L	E	T	V	K	N	N	I	E	W	L	K	Q	H	R	N	T	I	R	E	W	F	F	N	L	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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