PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4kw2A_

Fold library id	PDB Header	Molecule	Title
c4kw2A_	PDB header: isomerase	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of a putative uncharacterized protein (bdi_1873)2 from parabacteroides distasonis atcc 8503 at 2.32 a resolution

Links to external resources
Added to library: Sat Jul 6 08:29:31 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D W K V G I Q T W T F H N L T L X E T L D K T Q Q L G X G Y A E A F F F Q E L G A P F P K E T Y L N Y D L S D D N C A L L R H E F K I R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G T T S
T
T T
B
T T S
T T
B
S T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I K P I A F G V A S Y G T N E E W D K F F A F A H K I G A H I V T V E P E L N Q L D Y I E S L A K K Y D X E V A I H N H P A S A E V V E K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S
G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L K G R S P L X G V C A D I G H W K R V G E D P L K N L Q K L S G R I K V A H L K D L T D K X E D A T W G T G I L P V K A F V N E L K R Q H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
T T
T T G G G G G G T T T
S
G G G
S S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence F N G L I S I E Y D D F K S D I Q E I R N S L E F L Q K C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	W	K	V	G	I	Q	T	W	T	F	H	N	L	T	L	X	E	T	L	D	K	T	Q	Q	L	G	X	G	Y	A	E	A	F	F	F	Q	E	L	G	A	P	F	P	K	E	T	Y	L	N	Y	D	L	S	D	D	N	C	A	L	L	R	H	E	F	K	I	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						G	G	G	G	T	T	S													T								T	T		B			T	T	S		T	T		B		S	T	T															T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	K	P	I	A	F	G	V	A	S	Y	G	T	N	E	E	W	D	K	F	F	A	F	A	H	K	I	G	A	H	I	V	T	V	E	P	E	L	N	Q	L	D	Y	I	E	S	L	A	K	K	Y	D	X	E	V	A	I	H	N	H	P	A	S	A	E	V	V	E	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S															T		S								G	G	G												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	G	R	S	P	L	X	G	V	C	A	D	I	G	H	W	K	R	V	G	E	D	P	L	K	N	L	Q	K	L	S	G	R	I	K	V	A	H	L	K	D	L	T	D	K	X	E	D	A	T	W	G	T	G	I	L	P	V	K	A	F	V	N	E	L	K	R	Q	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		T	T									S	S			T	T			T	T	G	G	G	G	G	G	T	T	T								S			G	G	G			S	S				S	S													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	F	N	G	L	I	S	I	E	Y	D	D	F	K	S	D	I	Q	E	I	R	N	S	L	E	F	L	Q	K	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								T	T	T																T