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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kvfA_

Fold library idPDB HeaderMoleculeTitle
c4kvfA_PDB header: transport proteinChain: A: PDB Molecule: rhamnose abc transporter, periplasmic rhamnose-bindingPDBTitle: the crystal structure of a rhamnose abc transporter, periplasmic2 rhamnose-binding protein from kribbella flavida dsm 17836


Added to library: Sat Jun 8 09:48:57 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AADPNAPLKEGLKIAYLPKQLNNPYTDVEVGGGKVAVGEIKGEYKLVGPNDASASSQVSYINTLIQQQQD
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Known secondary structure (DSSP)


TTS


SS

SSSSSTT




TT



TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIVVAANDPNAVCPSLNQARKADIKVVTFDSDAAKTCRDAFINQATTQGIGESLVKXAKELAGGSGEIAV
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Known secondary structure (DSSP)

SSTTTTTT
SS


GGG
SSS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSATPNATNQNSWIEVXKTELAKPENAKLKLVKIAYGNDDDQKSFTEAQGLLQSYPNLKVIVSPTTVGIA
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Known secondary structure (DSSP) S
TT
TSGGGTT
TT

TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence AASRYVSASSYKGKVAITGLGLPNQXRQYVKDGTVKKFALWNPADIGYLAAYAGAALKSGQITGAQGEKF
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Known secondary structure (DSSP) TSTTTTTSB

TTS
S


TTS

S
TT
 .........290.........300.........310....
Sequence KAGKLGEYTVGAAGEIVLGPPTEFTAANIDQFNF
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Known secondary structure (DSSP)
GGG


GGG

S

TTTGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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