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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kv3A_

Fold library idPDB HeaderMoleculeTitle
c4kv3A_PDB header: protein transportChain: A: PDB Molecule: chimera fusion protein of esx-1 secretion system proteinPDBTitle: ubiquitin-like domain of the mycobacterium tuberculosis type vii2 secretion system protein eccd1 as maltose-binding protein fusion


Added to library: Sat Apr 12 08:33:31 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSG
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Known secondary structure (DSSP)


TTS
S


TTTT
S
SGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGK
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Known secondary structure (DSSP)
B





TTB
TTT
S

TTT
SS

SBGGGTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE
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Known secondary structure (DSSP)



SSTT
TTSSSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYL
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Known secondary structure (DSSP) TTS
GGGSS




BBTTB



BTT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR
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Known secondary structure (DSSP) SSS

SSBTT
S


STTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QTVDAALAAAQTNAAAMATTRVTILTGRRMTDLVLPAAVPMETYIDDTVAVLSEVLEDTPADVLGGFDFT
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Known secondary structure (DSSP) S
STT
TTSSS
GGGTTTTS
TT

TT
 .........430.........440.........450......
Sequence AQGVWAFARPGSPPLKLDQSLDDAGVVDGSLLTLVS
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Known secondary structure (DSSP) S




TTS



TTS
TTTTT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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