Fold library entry viewer: c4ktrE_

Added to library: Sat May 24 08:30:24 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	H	E	I	G	E	H	L	T	T	N	T	G	W	D	I	I	K	N	R	Y	E	A	A	Q	A	I	T	E	G	S	N	F	M	I	G	N	G	F	M	G	Y	R	G	T	F	A	E	D	G	K	D	A	Y	A	A	C	I	V	T	D	T	W	D	K	A	D	G	K	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				S	S	S	S						S			G	G	G								T					S	S					S			T	T			G	G	G	T												T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	L	S	T	V	P	N	A	L	L	T	L	L	H	V	D	G	E	P	F	I	M	S	E	E	A	A	S	F	E	R	T	L	D	L	S	Q	G	V	T	S	R	K	V	S	Q	R	M	K	N	G	A	T	I	T	I	H	E	E	K	F	A	S	Y	R	K	K	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T							T	T							S	S		S								T	T	T	T											T	T														S	S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	M	K	Y	T	V	E	S	D	Q	D	T	D	A	V	L	D	T	G	I	D	Y	D	V	W	S	I	N	G	D	H	L	Q	G	H	H	Y	F	S	H	P	T	G	D	G	V	T	A	K	T	V	S	Y	E	D	T	V	T	V	V	E	T	C	S	L	D	A	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	S	S																	T	T	S												T	T									S	S	S												B	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	E	E	D	Y	Q	N	P	D	G	S	G	R	T	F	S	L	S	L	E	A	G	K	P	V	T	L	E	K	A	M	I	I	Y	S	S	N	D	V	D	N	P	Q	D	E	A	L	L	E	A	K	H	M	Q	S	Y	E	E	E	K	A	A	N	R	L	E	W	D	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T												T	T														T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	S	H	Y	D	V	T	I	Q	N	N	I	I	D	Q	V	A	L	R	F	N	I	Y	H	A	I	I	A	T	P	V	H	K	S	L	P	I	G	A	R	G	L	S	C	Q	A	Y	Q	G	A	A	F	W	D	Q	E	I	Y	N	M	P	M	Y	L	Y	S	N	P	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																			S			S	S	S					T	T	T	T	S	S	S	G	G	G	G		B		T					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	R	N	I	L	K	Y	R	H	R	T	L	D	G	A	R	R	K	A	K	R	L	G	Y	E	G	A	Y	Y	A	W	I	S	G	K	T	G	D	E	L	C	P	D	F	F	F	K	D	V	L	S	G	R	D	I	R	N	H	F	N	D	W	Q	I	H	I	S	P	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T											T	T			S					S	S	B		S	S		S	B		S		S						T	T	T								T	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	Y	A	V	K	K	Y	H	Q	V	T	G	D	D	A	F	I	R	D	Y	G	A	E	M	I	F	E	I	A	R	F	L	A	S	H	A	V	Y	K	P	M	R	G	R	Y	E	F	M	R	V	Q	G	P	D	Q	Y	H	E	N	V	D	N	N	A	F	T	N	H	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T																				G	G	G	T						S	B			S	S	T	T			S	B	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	F	T	L	Q	A	A	D	E	L	L	Q	T	L	D	E	K	T	L	S	A	V	K	E	K	I	G	L	S	D	D	E	I	S	L	W	R	D	M	L	A	N	T	Y	V	P	K	P	D	K	H	G	I	I	E	Q	F	D	G	Y	Y	D	L	E	T	I	I	P	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S													T																B							T	T	S				S	S	T	T	G	G	G	S	B			S	S	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	V	T	E	R	L	I	K	E	D	E	Y	Y	G	Y	P	N	G	V	T	V	R	T	Q	C	I	K	Q	A	D	V	I	Q	L	F	V	L	H	P	H	L	Y	D	R	K	T	V	E	L	N	Y	E	F	Y	E	P	R	T	L	H	F	S	S	L	S	P	S	S	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	G		S	S	T	T	S		S	S	T	T	T		T	T	T	T	B	S		B	S	S		S									T	T	S	S													G	G	G	B				S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	V	A	A	Q	I	D	K	V	E	E	A	Y	R	N	F	R	K	S	V	M	I	D	L	L	N	T	N	E	A	V	S	G	G	T	F	I	G	G	I	H	T	A	A	N	G	A	S	W	Q	M	V	V	N	G	F	G	G	L	S	V	H	G	D	D	I	H	L	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T														T	T	T	T	T	T		S		S			T	T					S															T	T	T	S						S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Sequence	R	L	P	D	A	W	D	G	Y	T	F	K	A	I	V	K	G	Q	T	L	E	V	D	V	T	K	E	Q	I	T	I	T	N	K	S	E	D	R	K	P	L	T	L	H	I	F	G	E	K	S	V	L	D	S	E	R	I	T	K	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S									T	T									S	S									S	S									S	S						S		S

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PDB structure

FASTA sequence

Hidden Markov model

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