Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kslW_

Fold library idPDB HeaderMoleculeTitle
c4kslW_PDB header: hydrolaseChain: W: PDB Molecule: protein fam105b;PDBTitle: gumby/fam105b in complex with linear di-ubiquitin


Added to library: Sat Jun 8 09:04:38 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLSVAPEMDIMDYCKKEWRGNTQKATCMKMGYEEVSQKFTSIRRVRGDNYAALRATLFQAMSQAVGLPPW
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)

SB




SS

S
B

SS
T
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LQDPELMLLPEKLISKYNWIKQWKLLVDKIKESLTLLRKKWAGLAEMRTAEARQIACDELFTNEAEEYSL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)
GGGGG
GGGGG



S
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YEAVKFLMLNRAIELYNDKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGGLEQVEMFLLAYAV
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TT



TTSSS
SSTGGGBTTTB


 .........220.........230.........240.........250.........260
Sequence RHTIQVYRLSKYNTEEFITVYPTDPPKDWPVVTLIAEDDRHYNIPVRVCE
Predicted secondary structure





















SS confidence

















































Known secondary structure (DSSP) T
GGGTTSTTSSSS

TTS
SSSS

BSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D