Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kr7A_

Fold library idPDB HeaderMoleculeTitle
c4kr7A_PDB header: transferase/rnaChain: A: PDB Molecule: probable trna sulfurtransferase;PDBTitle: crystal structure of a 4-thiouridine synthetase - rna complex with2 bound atp


Added to library: Sat Apr 26 08:19:25 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELRVYIVRYSEIGLKGKNRKDFEEALRRNIERVTGMKVKRQWGRFLIPIDENVTLDDKLKKIFGIQNFSK
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)



TT

T
S

TT

TT


T
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GFLVSHDFEEVKKYSLIAVKEKLEKGNYRTFKVQAKKAYKEYKKGVYEINSELGALILKNFKELSVDVRN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
S
S


BSSTTSSS

TT
B

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PDFVLGVEVRPEGVLIFTDRVECYGGLPVGTGGKAVLLLSGGIDSPVAGWYALKRGVLIESVTFVSPPFT
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
STTS







TTSS


SSSTT

TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SEGAVEKVRDILRVLREFSGGHPLRLHIVNLTKLQLEVKKRVPDKYSLIMYRRSMFRIAEKIAEETGAVA
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)
STTTT


S
STTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence FYTGENIGQVASQTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAKEIGTYEISIKPYQDSCVFFAPKNP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)



SSSSTT

TT

S

TTTT

TT







SSSS
SS
 .........360.........370.........380......
Sequence ATRSHPSILEKLEQQVPDLPVLEEEAFTSRKVEVIE
Predicted secondary structure











SS confidence



































Known secondary structure (DSSP)
SS

TTGGG
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D