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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kqeA_

Fold library idPDB HeaderMoleculeTitle
c4kqeA_PDB header: ligaseChain: A: PDB Molecule: glycine--trna ligase;PDBTitle: complex structure reveals multiple conformations of glycyl-trna2 synthetase in glycylation


Added to library: Sat May 24 09:48:24 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IVDRAKMGDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEP
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Known secondary structure (DSSP)


TTSTTGGGT

TT

T




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADL
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Known secondary structure (DSSP) TT
BSSS

S
SS

TTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence FVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIG
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Known secondary structure (DSSP) TT
B
TTT

BB



S

SSSSS

S
STTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVE
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Known secondary structure (DSSP)


SS

SGGGS
S
GGG


TTGGGTTT

TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence QGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENECDCWDAESKTSYGWIEIVGCADRSCYDLSCH
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Known secondary structure (DSSP) TTSS

TT

GGG

TT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ARATKVPLVAEKPLKEPQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKT
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Known secondary structure (DSSP) T





S


B


SSTTTT

TS

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FQLTKDMINVKRFQKVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPL
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Known secondary structure (DSSP)
SSS

B









SSSS




TTTSS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDS
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Known secondary structure (DSSP)


TTTTT





S
TT


SSS
TTT
 .........570.........580.........590.......
Sequence MRQIRAEISELPSIVQDLANGNITWADVEARYPLFEG
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Known secondary structure (DSSP)

TTTTTSS
TTS
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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