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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kpnE_

Fold library idPDB HeaderMoleculeTitle
c4kpnE_PDB header: hydrolaseChain: E: PDB Molecule: nucleoside n-ribohydrolase 1;PDBTitle: plant nucleoside hydrolase - ppnrh1 enzyme


Added to library: Sat Nov 30 09:10:53 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPKKVIIDTDPGIDDAMAIFFALKSPELDVIALTTIYGNVRTPTATVNALHLLEFAGREDIPVSEGFRTS
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Known secondary structure (DSSP)




T
TT
SSSS
S
TTS


SB
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRGELKERIADFVHGADGLGNTYPTLSDRKPIDTFAPDYLIQKVNEFPGEITIVALGPLTNLAAAVECDP
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Known secondary structure (DSSP) TT

B

S


TTT
SSSSTT










SS
STTT
S
T
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence TFAKKVGQIIILGGAFQVNGNVNPAAEANIYGDPEAADIIFTCGADILVVGINITHQVYWTGKDLEDLGR
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Known secondary structure (DSSP) T
S


SSS

SSSSS


S
S

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SDSKFGKYLYAASHFYATYHREAYDIDAIYLHDPATMVAAVDPSLMTYATGAVRVQKDGICKGLTLFNNS
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Known secondary structure (DSSP) SS
T

S

GGG

SSSSTT

S
 .........290.........300.........310........
Sequence NKVWHDPTDWCGIPPVKVAVTVDRERVASLLKERLTAP
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Known secondary structure (DSSP)



SS

TTTT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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