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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kp1A_

Fold library idPDB HeaderMoleculeTitle
c4kp1A_PDB header: isomeraseChain: A: PDB Molecule: isopropylmalate/citramalate isomerase large subunit;PDBTitle: crystal structure of ipm isomerase large subunit from methanococcus2 jannaschii (mj0499)


Added to library: Sat Apr 26 08:19:02 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GXTIVEKILAKASGKKEVSPGDIVXANIDVAXVHDITGPLTVNTLKEYGIEKVWNPEKIVILFDHQVPAD
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Known secondary structure (DSSP)


T
S


TT

STTTT

S
S
TTS

SS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SIKAAENHILXRKFVKEQGIKYFYDIREGVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGST
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Known secondary structure (DSSP)
T


TTSB
TT


TT
SSTTGGGGGGGT


 .........150.........160.........170.........180.........190.........200.........210
Sequence DXAHVFATGKLWFKVPETIYFNITGDLQPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKXSIASRX
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Known secondary structure (DSSP) S


S


TT


TTTTBT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TXTNXAIEXGGKTGIIEPDEKTIQYVKEAXKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHN
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Known secondary structure (DSSP) TGGGGTBS



T










TT


SGGG



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDNVKQAREVAGKPIDQVFIGSCTNGRLEDLRXAIKIIEKHGGIADDVRVVVTPASREEYLKALKEGIIE
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Known secondary structure (DSSP) TT
GGGGTT
B
SS
TT


TTS

TT


SBTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KFLKYGCVVTNPSCSACXGSLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDP
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Known secondary structure (DSSP) TT




S

BTTB
TT


SS


SS

SSS


SB


G
 ...
Sequence RDL
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) GG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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