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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kncA_

Fold library idPDB HeaderMoleculeTitle
c4kncA_PDB header: sugar binding proteinChain: A: PDB Molecule: alginate biosynthesis protein algx;PDBTitle: structural and functional characterization of pseudomonas aeruginosa2 algx


Added to library: Sat Jun 29 08:25:47 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GNLCPAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTYDLRTDFGTSAEGWRELRALRDELKRKGIELVVV
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Known secondary structure (DSSP)

S
GGGG
GGG

STT
S
STT
S






TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YQPTRGLVNREKLSPAEKAGFDYELAKKNYLATIARFRQAGIWTPDFSPLFDEKEEHAYYFKGDHHWTPH
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Known secondary structure (DSSP)

GGGS
S
TT
B



GGGTT


SS
SB
TTSSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence GARRSAKIVAETLKQVPGFEEIPKKQFESKRVGLLSKLGTFHKAAAQLCGNSYATQYVDRFETEPVGNPQ
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Known secondary structure (DSSP) TTSTTGGGS















S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IALVGTSNSGPAYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFATHYDMAQ
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Known secondary structure (DSSP)
SGGGSTTTT
S



TT
TTTTTSS

STTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KSFYRQAMPLVDNGCSGRKTVLSRKVKLRQGRNEVLLNSAALPIRSGSYVADVTYSDPSVHELKNTIWYM
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Known secondary structure (DSSP) TTTTTTS


SS


TT



BGGGSSTT

T
 .........360.........370.........380.........390.........400.........410
Sequence NGRREQLKIEQSKAVDTGGRYVFQLRNDSDWADQQFLSLEIEAPDMPQGLEVQASICQAA
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Known secondary structure (DSSP) TS


TT


TT


SSSSTT
B




TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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