Fold library entry viewer: c4knaA_

Added to library: Sat Jun 8 09:45:57 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	E	L	F	I	D	G	A	W	V	D	G	A	G	P	V	F	A	S	R	N	P	G	T	N	E	R	V	W	E	G	A	S	A	S	A	D	D	V	E	R	A	V	A	S	A	R	R	A	F	A	A	W	S	A	L	D	L	D	A	R	C	T	I	V	K	R	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							S								T	T	T																																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	L	V	E	R	K	E	A	L	A	T	M	I	G	R	E	T	G	K	P	L	W	E	A	R	T	E	V	A	S	M	A	A	K	V	D	I	S	I	T	A	Y	H	E	R	T	G	E	K	R	A	P	M	A	D	G	V	A	V	L	R	H	R	P	H	G	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T																																									S								T	T											S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	F	G	P	Y	N	F	P	G	H	L	P	N	G	H	I	V	P	A	L	I	A	G	N	T	V	V	F	K	P	S	E	L	A	P	G	V	A	R	A	T	V	E	I	W	R	D	A	G	L	P	A	G	V	L	N	L	V	Q	G	E	K	D	T	G	V	A	L	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	T	T														T									T	T															T	T			T	T	S							S									T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	R	Q	I	D	G	L	F	F	T	G	S	S	D	T	G	T	L	L	H	K	Q	F	G	G	R	P	E	I	V	L	A	L	E	M	G	G	N	N	P	L	V	V	A	E	V	E	D	I	D	A	A	V	H	H	A	I	Q	S	A	F	L	S	A	G	Q	R	C	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S						S												T	T	T		T	T	S																		S															G	G	G	G	T	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	R	R	I	L	V	P	R	G	A	F	G	D	R	F	V	A	R	L	A	D	V	A	S	K	I	T	A	S	V	F	D	A	D	P	Q	P	F	M	G	A	V	I	S	A	R	A	A	S	R	L	V	A	A	Q	A	R	L	V	G	L	G	A	S	P	I	I	E	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																T			B			T	T		S	S			S	B				S																		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	R	D	P	A	L	G	F	V	N	A	A	I	L	D	V	T	N	V	R	E	L	P	D	E	E	H	F	G	P	L	A	Q	I	V	R	Y	T	D	L	D	D	A	I	A	R	A	N	D	T	A	F	G	L	S	A	G	L	L	A	D	D	E	Q	A	W	H	T	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S		T	T	S			B								T	T		S	S								S	S								S	S									T		S	S			S							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Sequence	R	A	I	R	A	G	I	V	N	W	N	R	P	T	N	G	A	S	S	A	A	P	F	G	G	A	G	R	S	G	N	H	R	P	S	A	Y	Y	A	A	D	Y	C	A	Y	P	M	A	S	V	E	S	A	Q	L	Q	M	P	A	S	L	S	P	G	L	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S					S	S		T	T				T	T	S					S	G	G	G		S	S					T	T															S	S					S	S			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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