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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kkiA_

Fold library idPDB HeaderMoleculeTitle
c4kkiA_PDB header: transport proteinChain: A: PDB Molecule: transcobalamin-1;PDBTitle: crystal structure of haptocorrin in complex with cncbl


Added to library: Sat Jul 20 08:50:49 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EICEVSEENYIRLKPLLNTMIQSNYNRGTSAVNVVLSLKLVGIQIQTLMQKMIQQIKYNVKSRLSDVSSG
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Known secondary structure (DSSP)





GGGGGGGGGG
TTS
STT



TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELALIILALGVCRNAEENLIYDYHLIDKLENKFQAEIENMEAHNGTPLTNYYQLSLDVLALCLFNGNYST
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Known secondary structure (DSSP) TSS
SGGGTTTTT

SS
TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence AEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQIKADEGSLKNISIYTKSLVEKILSEKK
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Known secondary structure (DSSP)

TT
GGGTT
TTS



TTTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence ENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDIN
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Known secondary structure (DSSP) TTS
BSSTTTT
GGG

TTT

TTTT
STT

GGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence KDSSCVSASGNFNIQSYISVNYSVRINETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERSWGPYI
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Known secondary structure (DSSP) SS



SS







SSSTT
B


SSS
 .........360.........370.........380.........390........
Sequence TCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEVRWSKYL
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Known secondary structure (DSSP) TT
BTTTTTT
SS
TTT
B

TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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