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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kh3A_

Fold library idPDB HeaderMoleculeTitle
c4kh3A_PDB header: immune systemChain: A: PDB Molecule: antigen 43;PDBTitle: structure of a bacterial self-associating protein


Added to library: Sat Jan 18 08:41:22 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADIVVHPGETVNGGTLVNHDNQFVSGTANGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGRQI
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Known secondary structure (DSSP)

TT



TT
SSS


B
TT
TT
S




TT
S

TTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence VQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTIKHGGLATGTIVNTG
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Known secondary structure (DSSP)
TT
S

TT
SSS

TT

TT
S

TT

TT
S


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence AESSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGGDQTVHGEAHNTRLEGGNQYVHNGGTATETL
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Known secondary structure (DSSP)



SS
TTB
TT
TT
SSB

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence INRDGWQVIKEGGTAAHTTINQKGKLQVNAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKAD
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Known secondary structure (DSSP)
TT

TT
S

TT

TT

TT
TTSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NVVLENGGRLDVLSGHTATNTRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG
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Known secondary structure (DSSP) S

TT

TT
S

TT

TT

TT
TTS
TTS
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDA
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Known secondary structure (DSSP) TS
TT

TT
S
B
SS
STTSSSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGA
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Known secondary structure (DSSP) SSSS

SSSS

SS

TTTT
 ..
Sequence ID
Predicted secondary structure
SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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