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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kf8A_

Fold library idPDB HeaderMoleculeTitle
c4kf8A_PDB header: structural proteinChain: A: PDB Molecule: nup188;PDBTitle: nup188(aa1445-1827) from myceliophthora thermophila


Added to library: Sat Jun 22 08:28:35 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLLPKDISQLLSLVSATINGVDNPWSKDQISYFRTLLKVLFVVLRGTKHSVTQLVLTTLDRVVARSFRNL
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Known secondary structure (DSSP)




S
SSTT
TTT
S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AALVAATTPEDLALITAILQACLSVPGIEQCQLQVLNIXSSHNVLQVATSLFSWSDRLAEKGDPIYGELA
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Known secondary structure (DSSP) T






STTTTSSSSTGGGG
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLLLLELSALPALAEQLACDGLLGHLTSANLAGFXRRANVSPFTDNAGAARCYAIWAKGILPLLLNILGA
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Known secondary structure (DSSP) TSTTSTTTSTT

SS
S
TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LGATIAPEVAFVLNQFPNLLRSSVDRLEAPGPHYFVALVALSEVHSLALLTRVLAALRSGNARDIPEVVW
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Known secondary structure (DSSP) TTTSSTT
TT







B
STT
SS






 .........290.........300.........310.........320.........330.........340....
Sequence DSGAVLENVEFWLASRKVLRERLLPLNPREAEWRGXKASEGSGCETKLEEKAVGLLEGIRDVLA
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Known secondary structure (DSSP)
T
B


SS


SS
S
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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