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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4kd2e_ | PDB header: ribosome/antibiotic | Chain: E: PDB Molecule: 50s ribosomal protein l3; | PDBTitle: 70s ribosome translocation intermediate gdpnp-i containing elongation2 factor efg/gdpnp, mrna, and trna bound in the pe*/e state. this entry3 contains the 50s ribosomal subunit b. the 30s subunit b can be found4 in 4kd0. molecule a in the same asymmetric unit is deposited as 4kcy5 (30s) and 4kcz (50s). |
Added to library: Sat Jul 6 08:30:08 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X | A | A | P | A | E | E | K | T | E | F | D | V | I | L | K | E | A | G | A | K | K | L | E | V | I | K | E | L | R | A | I | T | G | L | G | L | K | E | A | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | B | S | S | T | T | S | T | T | T | T | T | T | S | S | T | T | T | T | T | T | S | T | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Sequence | D | L | A | E | K | G | G | P | V | K | E | G | V | S | K | Q | E | A | E | E | I | K | K | K | L | E | A | V | G | A | V | V | ||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | S | B | S |
Download: | PDB structure | FASTA sequence |
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