Fold library entry viewer: c4kc5D_

Added to library: Sat Sep 21 10:10:00 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	E	L	A	N	Y	I	A	V	I	G	L	G	G	Y	Y	P	G	A	D	S	I	D	E	L	W	Q	N	L	A	N	G	V	D	C	M	S	D	F	P	A	D	R	W	D	H	S	K	I	Y	Y	K	N	R	K	V	L	G	K	T	T	C	I	N	G	S	F	I	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G												T	T		S	S										T	T					B				T	T	T			G	G	G	T	B		S	S	T	T	S	T	T		B					B	B			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	D	K	F	D	Y	S	Y	F	K	M	P	K	V	Y	A	D	H	M	S	P	E	V	R	L	F	L	Q	V	A	V	H	T	F	E	D	A	G	Y	S	K	E	T	L	L	S	R	Y	N	G	D	V	G	V	L	L	G	T	M	S	N	D	Y	H	Y	Y	G	F	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B			T	T	T	T	T									S																			T											T	T									S				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	V	F	R	G	S	M	A	S	G	S	G	M	A	T	I	P	M	T	V	S	Y	F	Y	G	L	T	G	P	S	L	F	I	D	T	M	C	S	S	S	S	T	C	I	H	T	A	C	Q	M	L	K	H	D	E	T	K	M	V	L	A	G	G	L	N	L	M	Y	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								T	T										T	T			S								G	G	G															T	T	S	S	S												S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	T	T	V	N	T	S	Q	G	N	F	T	S	I	T	S	E	S	V	N	S	Y	G	V	G	A	D	G	T	V	I	G	E	G	I	G	A	V	L	L	K	R	L	D	R	A	I	A	D	R	D	Q	I	Y	G	V	I	K	G	S	A	M	T	N	A	G	E	R	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S		B		S	S		S	S			T	T	B	S			S	S	B		B	B																	T	T																	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	N	V	P	N	P	D	L	Q	T	L	A	I	R	Q	A	M	D	Q	A	K	V	H	P	S	S	I	S	Y	I	E	G	H	G	S	G	T	K	L	G	D	P	I	E	V	L	G	L	N	N	A	F	R	W	A	T	D	D	K	Q	F	C	Y	L	G	S	I	K	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																			T			G	G	G												T	T															T	T					S							T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	G	H	L	L	A	A	S	G	I	A	G	L	T	K	T	L	L	Q	F	K	H	K	Q	I	A	P	S	I	H	S	S	Q	L	N	Q	D	I	D	F	A	D	T	P	F	V	V	P	Q	Q	L	I	E	W	R	Q	P	E	R	I	I	N	G	R	K	Q	V	F	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		G	G	G																T							S		S	S	B		T	T			G	G	G	S	S						S												T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	A	G	L	T	S	I	A	A	G	G	M	N	A	H	M	I	V	E	E	Y	P	E	P	A	D	S	A	G	Q	I	S	E	D	Q	L	V	F	V	F	S	V	H	K	L	A	L	L	A	Q	N	L	T	S	F	R	D	W	L	A	S	S	E	A	P	L	A	Q	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S														T	T	T	T		B			G	G	G								S		G	G	G														T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	T	L	Q	V	G	K	N	N	L	R	N	R	L	A	I	R	C	R	T	R	Q	A	L	S	R	A	L	N	A	C	I	D	G	H	Y	Q	S	S	A	D	S	K	I	F	Y	R	F	Q	E	S	D	A	V	Q	P	L	E	D	P	L	A	P	L	L	T	Q	W	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S				S								S	S													T	T					B	T	T	B							G	G	G	T								T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	D	S	Q	V	D	W	A	S	L	Y	A	Q	P	P	V	R	I	S	L	P	A	Y	R	F	E	K	T	R	C	W	Y	T	E	E	G	Y	E	S	S	I	V	N	P	L	M	F	K	N	K	L	H	P	L	V	A	K	N	C	S	T	P	Q	P	G	A	I	F	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S				G	G	G	G		S	B																B			S	S		T	T				T	T	T	S						T		S	B	T	T	B							S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	F	V	E	D	E	L	L	D	Y	V	Y	S	G	R	G	G	R	R	L	S	A	F	N	F	A	D	V	A	L	A	M	P	A	L	A	S	R	F	D	G	R	T	L	S	V	S	C	A	F	E	H	Y	I	A	D	W	T	T	V	T	G	L	E	Y	R	L	F	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G		T	T	T					T	T						T	T													T	T		S	T	T														S		G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	S	E	Q	L	E	L	E	F	D	F	R	R	S	G	E	Q	P	T	H	L	G	F	A	V	I	N	P	L	T	S	D	E	P	P	L	P	Q	Q	W	L	D	D	A	R	E	L	L	N	R	Q	A	L	Q	A	G	R	Q	L	S	A	A	E	V	S	Q	R	L	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T																S	S																					T	T		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	G	Y	D	F	A	P	Y	L	D	H	D	G	E	L	T	I	G	R	S	G	L	V	L	K	G	R	P	P	V	N	R	H	N	H	Y	A	D	N	V	Q	L	S	P	Y	L	A	T	T	I	D	K	A	L	Y	L	L	L	D	E	L	G	L	P	Q	G	R	V	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		B		T	T	T	S										S	S										S			S					S			S	S																			T	T		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	R	N	I	E	R	L	C	C	Y	H	T	P	A	G	G	F	S	V	V	L	S	G	I	G	L	N	D	N	E	L	S	L	S	L	L	V	L	D	E	R	E	Q	I	C	V	K	L	D	K	V	S	L	Y	L	G	K	Q	E	V	A	S	V	D	R	K	H	S	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S													T	T											T	T																								T	T		G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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