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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4kbmA_

Fold library idPDB HeaderMoleculeTitle
c4kbmA_PDB header: transferase/transcriptionChain: A: PDB Molecule: dna-directed rna polymerase subunit beta;PDBTitle: structure of the mtb card/rnap beta subunit b1-b2 domains complex


Added to library: Sat Oct 5 08:26:55 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGSHMMLLDVQTDSFEWLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVK
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Known secondary structure (DSSP)
B
SS

TT
T
SS





TTSS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence APVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVY
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Known secondary structure (DSSP) S
TT


TTTT
B
TTS
TT




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQIVERFGFSE
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Known secondary structure (DSSP)
TTT


SBS


TTS
TT


TT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHVGE
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Known secondary structure (DSSP)



STTS


SSTTT
B
T
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRM
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Known secondary structure (DSSP)




S

TT



TTS








STTS
 .........360.........370.........380......
Sequence ERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFG
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Known secondary structure (DSSP) S
TTT




T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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