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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k8nF_

Fold library idPDB HeaderMoleculeTitle
c4k8nF_PDB header: lipid transportChain: F: PDB Molecule: glycolipid transfer protein domain-containing protein 1;PDBTitle: crystal structure of human ceramide-1-phosphate transfer protein2 (cptp) in complex with 18:1 ceramide-1-phosphate (18:1-c1p)


Added to library: Sat Jul 20 08:34:16 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNSLGTIFSFISKDVVSKLRIMERLRGGPQSEHYRSL
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Known secondary structure (DSSP)
GGGTTTS
TTS

BTT
TTSSTTGGGGSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAMVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAY
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Known secondary structure (DSSP) TT



SSS
S
TT
TS
TTSBTTTTT
 .........150.........160.........170.........180.........190.........200.....
Sequence HPWVVRRAVTVAFCTLPTREVFLEAMNVGPPEQAVQMLGEALPFIQRVYNVSQKLYAEHSLLDLP
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Known secondary structure (DSSP)

S

BTTTTSS
SSTT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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