PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4k83A_

Fold library id	PDB Header	Molecule	Title
c4k83A_	PDB header: structural protein	Chain: A: PDB Molecule: lv-ranaspumin (lv-rsn-1);	PDBTitle: crystal structure of lv-ranaspumin (lv-rsn-1) from the foam nest of2 leptodactylus vastus, orthorhombic crystal form

Links to external resources
Added to library: Sat Mar 8 08:12:16 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G P G T A C L T K A L K D S G D L L V E L A V I I C A Y Q N G K D L Q E Q D F K E L K E L L E R T L E R A G C A L D D I V A D L G L E E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G S I G V S T G D I I Q G L Y K L L K E L K I D E T V F N A V C D V T K K M L D N K C L P K I L Q G D L V K F L K D L K Y K V C I E G G D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T
T T
T T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence E L I I K D L K I I L E R L P C V L G G V G L D D L F K N I F V K D G I L S F E G I A K P L G D L L I L V L C P N V K N I N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T T
T T T T
G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	G	T	A	C	L	T	K	A	L	K	D	S	G	D	L	L	V	E	L	A	V	I	I	C	A	Y	Q	N	G	K	D	L	Q	E	Q	D	F	K	E	L	K	E	L	L	E	R	T	L	E	R	A	G	C	A	L	D	D	I	V	A	D	L	G	L	E	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T																	S	S																				T	T											T					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	I	G	V	S	T	G	D	I	I	Q	G	L	Y	K	L	L	K	E	L	K	I	D	E	T	V	F	N	A	V	C	D	V	T	K	K	M	L	D	N	K	C	L	P	K	I	L	Q	G	D	L	V	K	F	L	K	D	L	K	Y	K	V	C	I	E	G	G	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S																	T	T																			T	T								T	T												T	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	E	L	I	I	K	D	L	K	I	I	L	E	R	L	P	C	V	L	G	G	V	G	L	D	D	L	F	K	N	I	F	V	K	D	G	I	L	S	F	E	G	I	A	K	P	L	G	D	L	L	I	L	V	L	C	P	N	V	K	N	I	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G	G	T	T								T	T					T	T						G	G	G										T