Fold library entry viewer: c4k6mA_

Added to library: Sat Aug 31 08:28:52 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	T	L	G	E	Q	W	K	E	K	L	N	A	M	S	R	E	E	F	F	K	Y	R	R	E	A	I	I	E	V	D	R	T	E	A	R	R	A	R	R	E	N	N	I	V	G	G	H	P	V	S	R	G	S	A	K	L	R	W	L	V	E	K	G	F	V	S	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											T	S									T	T	T	T															T	T			S	S				S	S	T										T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	V	I	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	L	K	K	V	Q	E	V	R	G	Y	T	K	G	G	A	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	L	V	S	L	K	S	G	V	D	V	F	Y	K	P	S	E	P	S	D	T	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		T	T									T	S	T	T											S	T	T	S									T	T	G	G	G						S			G	G	G	S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	D	I	G	E	S	S	P	S	P	E	V	E	E	Q	R	T	L	R	V	L	E	M	T	S	D	W	L	H	R	G	P	R	E	F	C	I	K	V	L	C	P	Y	M	P	K	V	I	E	K	M	E	V	L	Q	R	R	F	G	G	G	L	V	R	L	P	L	S	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S																					T	T			S							S		T	T	S																						T	T	S		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	N	H	E	M	Y	W	V	S	G	A	A	G	N	V	V	H	A	V	N	M	T	S	Q	V	L	L	G	R	M	D	R	T	V	W	R	G	P	K	Y	E	E	D	V	N	L	G	S	G	T	R	A	V	G	K	G	S	N	Q	E	K	I	K	K	R	I	Q	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T			S																	T	T		S	S																				S						G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	E	F	A	T	T	W	H	K	D	P	E	H	P	Y	R	T	W	T	Y	H	G	S	Y	E	V	K	A	T	G	S	A	S	S	L	V	N	G	V	V	K	L	M	S	K	P	W	D	A	I	A	N	V	T	T	M	A	M	T	D	T	T	P	F	G	Q	Q	R	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		T	T		B			T	T				S	S	S																									T		G	G	G	G	G						T					B		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	E	K	V	D	T	K	A	P	E	P	P	A	G	A	K	E	V	L	N	E	T	T	N	W	L	W	A	Y	L	S	R	E	K	R	P	R	L	C	T	K	E	E	F	I	K	K	V	N	S	N	A	A	L	G	A	V	F	A	E	Q	N	Q	W	S	T	A	R	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S																										T	T	T															S		T	T						S	S	G	G	G				S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	D	D	P	R	F	W	E	M	V	D	E	E	R	E	N	H	L	R	G	E	C	H	T	C	I	Y	N	M	M	G	K	R	E	K	K	P	G	E	F	G	K	A	K	G	S	R	A	I	W	F	M	W	L	G	A	R	Y	L	E	F	E	A	L	G	F	L	N	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																	T	T			S	S															B	T	T	B			B																				T					T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	W	L	S	R	E	N	S	G	G	G	V	E	G	S	G	V	Q	K	L	G	Y	I	L	R	D	I	A	G	K	Q	G	G	K	M	Y	A	D	D	T	A	G	W	D	T	R	I	T	R	T	D	L	E	N	E	A	K	V	L	E	L	L	D	G	E	H	R	M	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S					S	S	B		T	T															T	S	S	S	S							B	T	T	G	G	G	G										G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	A	I	I	E	L	T	Y	R	H	K	V	V	K	V	M	R	P	A	A	E	G	K	T	V	M	D	V	I	S	R	E	D	Q	R	G	S	G	Q	V	V	T	Y	A	L	N	T	F	T	N	I	A	V	Q	L	V	R	L	M	E	A	E	G	V	I	G	P	Q	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S										G	G	G										S	S	S			T	T		T	T																					T	T	S			G	G	G	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	Q	L	P	R	K	N	K	I	A	V	R	T	W	L	F	E	N	G	E	E	R	V	T	R	M	A	I	S	G	D	D	C	V	V	K	P	L	D	D	R	F	A	T	A	L	H	F	L	N	A	M	S	K	V	R	K	D	I	Q	E	W	K	P	S	H	G	W	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																							T	T					T	T							S	S	S	S	G	G	G								T	T			B	S	S	S		T	T	S						S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	W	Q	Q	V	P	F	C	S	N	H	F	Q	E	I	V	M	K	D	G	R	S	I	V	V	P	C	R	G	Q	D	E	L	I	G	R	A	R	I	S	P	G	A	G	W	N	V	K	D	T	A	C	L	A	K	A	Y	A	Q	M	W	L	L	L	Y	F	H	R	R	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			B	T	T	B								T	T	S																		T			S	S	T	T																						T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	L	M	A	N	A	I	C	S	A	V	P	V	D	W	V	P	T	G	R	T	S	W	S	I	H	S	K	G	E	W	M	T	T	E	D	M	L	Q	V	W	N	R	V	W	I	E	E	N	E	W	M	M	D	K	T	P	I	T	S	W	T	D	V	P	Y	V	G	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		T	T					S		S				T	T				T	T	S	S	S	S											T	T	T		T	T									S	G	G	G	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
Sequence	E	D	I	W	C	G	S	L	I	G	T	R	S	R	A	T	W	A	E	N	I	Y	A	A	I	N	Q	V	R	A	V	I	G	K	E	N	Y	V	D	Y	M	T	S	L	R	R	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			T	T										T														S	S						G	G	G	S	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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