Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k6lF_

Fold library idPDB HeaderMoleculeTitle
c4k6lF_PDB header: toxinChain: F: PDB Molecule: cytolethal distending toxin subunit b homolog;PDBTitle: structure of typhoid toxin


Added to library: Sat Jul 20 08:58:57 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NISDYKVMTWNLQGSSASTESKWNVNVRQLLSGTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDE
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
GGGS




TTTT
STTS
SS
SS

TT







S



 .........80.........90.........100.........110.........120.........130.........140
Sequence YTWNLGTTSRQDIRYIYHSAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHAL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
S
SSS




STT



SS

S

S
TTS

TT
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence ASGGPDAAAIVRVTINFFRQPQMRHLSWFLAGDFNRSPDRLENDLMTEHLERVVAVLAPTEPTQIGGGIL
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TTT
TTTSTTTTT

SS
TT
TTT

SS
SBTTS


 .........220.........230.........240.......
Sequence DYGVIVDRAPYSQRVEALRNPQLASDHYPVAFLARSC
Predicted secondary structure













SS confidence




































Known secondary structure (DSSP) TTSTTGGG



SSSB





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D