Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k68B_

Fold library idPDB HeaderMoleculeTitle
c4k68B_PDB header: hydrolaseChain: B: PDB Molecule: gh10 xylanase;PDBTitle: structure of a novel gh10 endoxylanase retrieved from sugarcane soil2 metagenome


Added to library: Sat Oct 26 08:29:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIKDFYKDDFRIGTAVATATLTMKEKKPLLALIAREFNAITPENCMKWEPLKPQDKDWHWEAADKFVEFG
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
TTTT


GGG
SSSTTSSGGG
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence EKHKMYIVGHNLVWHSQVPKEVFLNESGGTISKEALTAKMQDHIATLAGRYKGRIQAWDVVNEAVEDDGS
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT


SB
SSS

GGGGB
TTSSB

TTTT
SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WRKSPWYNIMGEDFIAKAFTMAHEVDPKAHLIYNDYNTESPIKRNFIVGMIKNFKKQGVPIHGVGMQEHL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)



TT
TTSS
TT
T





 .........220.........230.........240.........250.........260.........270.........280
Sequence AIDGPSVDEIEKTLIALADAGVRAHITELDIDVLPSVWNLPTAEVSTRFEYKPERDPYIQGLPKDMEEKL
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) SS
S
T

S

SSSS
GGG

S
B


GGG


TT


 .........290.........300.........310.........320.........330.........340.....
Sequence AKRYEDIFKIYLKHRDKIERVTLWGTADNETWLNDFPIKGRTNYPLLFDRNQKPKPAYFRLLDLK
Predicted secondary structure




































SS confidence
































































Known secondary structure (DSSP) TGGGS
SBTTS
GGGTSSBTT




SSB
TTS
B
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D