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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k5uD_

Fold library idPDB HeaderMoleculeTitle
c4k5uD_PDB header: immune systemChain: D: PDB Molecule: variable lymphocyte receptor;PDBTitle: recognition of the bg-h antigen by a lamprey variable lymphocyte2 receptor


Added to library: Sat Jun 29 08:42:04 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ACPSQCSCSGTEVNCAGKSLASVPAGIPTTTRVLYLNSNQITKLEPGVFDRLANLRELHLWGNQLVSLPP
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Known secondary structure (DSSP)


TTSTT
TTS

SS

S


TT
S

SS





TTTTTT
TT
S

SS





T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVFDNLANLEKLWLNSNQLTSLPAGLFDRLVNLEHLGLCCMKLTELPSGAFDKLTRLKQLGLDQNQLKSI
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Known secondary structure (DSSP) TTTTT
TT


TTS

S


TTTTTT
TT



SS





TTTTTT
TT



SS

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PDGAFARLPSLTHVWLHTNPWDCQCTDILYLSGWVAQHSSIVGEGWPWRHSPDSAKCSGTNTPVRAVTEA
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Known secondary structure (DSSP)
TTTTTT
TT



SS
B
TTBGGGTGGGTTTT
TT
SBBTTT

BGGG

GG
 .......
Sequence STSPSKC
Predicted secondary structure






SS confidence






Known secondary structure (DSSP) G
BGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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