PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4k40B_

Fold library id	PDB Header	Molecule	Title
c4k40B_	PDB header: hydrolase	Chain: B: PDB Molecule: gdsl-like lipase/acylhydrolase family protein;	PDBTitle: peptidoglycan o-acetylesterase in action, 0 min

Links to external resources
Added to library: Sat Sep 6 08:26:56 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L L T D Y G N A S A S P W M K K L Q S V A Q G S G E T F R I L Q I G D S H T A G D F F T D S L R K R L Q K T W G D G G I G W V Y P A N V K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
T T
S T
B
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q R M A A V R H N G N W Q S L T S R N N T G D F P L G G I L A H T G S G G S M T L T A S D G I A S K Q R V S L F A K P L L A E Q T L T V N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T
S
T T S
T T S S S
S S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N T V S A N G G G W Q V L D T G A A L P L T I H T E M P W D I G F I N I E N P A G G I T V S A M G I N G A Q L T Q W S K W R A D R M N D L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S S S S
T T
T T
G G G G G G S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Q T G A D L V I L S Y G T N E A F N N N I D I A D T E Q K W L D T V R Q I R D S L P A A G I L I I G A P E S L K N T L G V C G T R P V R L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T G G G
T T
T T
S B
S S S
B
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . .

Sequence E V Q Q M Q R R V A R Q G Q T M F W S W Q N A M G G I C S M K N W L N Q G W A A K D G V H F S A K G Y R R A A E M L A D S L E E L V R S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T S T T
T
B
T T S S S B
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	T	D	Y	G	N	A	S	A	S	P	W	M	K	K	L	Q	S	V	A	Q	G	S	G	E	T	F	R	I	L	Q	I	G	D	S	H	T	A	G	D	F	F	T	D	S	L	R	K	R	L	Q	K	T	W	G	D	G	G	I	G	W	V	Y	P	A	N	V	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		G	G	G												T	T												S					T																	B								S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	R	M	A	A	V	R	H	N	G	N	W	Q	S	L	T	S	R	N	N	T	G	D	F	P	L	G	G	I	L	A	H	T	G	S	G	G	S	M	T	L	T	A	S	D	G	I	A	S	K	Q	R	V	S	L	F	A	K	P	L	L	A	E	Q	T	L	T	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						S						T	T	T			S				T	T	S							T	T								S	S	S														S	S	T	T						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	T	V	S	A	N	G	G	G	W	Q	V	L	D	T	G	A	A	L	P	L	T	I	H	T	E	M	P	W	D	I	G	F	I	N	I	E	N	P	A	G	G	I	T	V	S	A	M	G	I	N	G	A	Q	L	T	Q	W	S	K	W	R	A	D	R	M	N	D	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S									S	S						S	S												T	T											T	T			G	G	G	G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	T	G	A	D	L	V	I	L	S	Y	G	T	N	E	A	F	N	N	N	I	D	I	A	D	T	E	Q	K	W	L	D	T	V	R	Q	I	R	D	S	L	P	A	A	G	I	L	I	I	G	A	P	E	S	L	K	N	T	L	G	V	C	G	T	R	P	V	R	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		S								T	T	G	G	G		T	T																						T	T													S	B			S	S	S		B			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Sequence	E	V	Q	Q	M	Q	R	R	V	A	R	Q	G	Q	T	M	F	W	S	W	Q	N	A	M	G	G	I	C	S	M	K	N	W	L	N	Q	G	W	A	A	K	D	G	V	H	F	S	A	K	G	Y	R	R	A	A	E	M	L	A	D	S	L	E	E	L	V	R	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T											T	S	T	T									T		B		T	T	S	S	S	B																						T