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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k3yA_

Fold library idPDB HeaderMoleculeTitle
c4k3yA_PDB header: viral proteinChain: A: PDB Molecule: neuraminidase;PDBTitle: crystal structure of a subtype n11 neuraminidase-like protein of2 a/flat-faced bat/peru/033/2010 (h18n11)


Added to library: Sat Oct 26 08:23:14 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATPLVLGENLCSINGWVPTYRGEGTTGKIPDEQMLTRQNFVSCSDKECRRFFVSMGYVSEQMNVYSVKLG
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Known secondary structure (DSSP)






SSB


S
GGGGSSB
TTS



SS
S



TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPPTPDKLKFEAVGWSASSCHDGFQWTVLSVAGDGFVSILYGGIITDTIHPTNGGPLRTQASSCICNDGT
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Known secondary structure (DSSP) S


GGG

S
SS
TTTTT

SSSS

B

SSB
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CYTIIADGTTYTASSHRLYRLVNGTSAGWKALDTTGFNFEFPTCYYTSGKVKCTGTNLWNDAKRPFLEFD
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Known secondary structure (DSSP)
SSGGG
TT

TTS

TT
SSS
SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence QSFTYTFKEPCLGFLGDTPRGIDTTNYCDKTTTEGEGGIQGFMIEGSNSWIGRIINPGSKKGFEIYKFLG
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Known secondary structure (DSSP) TT





SS

SSS

S




SS


TT
SS





SSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLFSVQTVGNRNYQLLSNSTIGRSGLYQPAYESRDCQELCFWIEIAATTKAGLSSNDLITFCGTGGSMPD
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Known secondary structure (DSSP)
TT
TT










SSB

BSS

SS



 ....
Sequence VNWG
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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