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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k3eI_

Fold library idPDB HeaderMoleculeTitle
c4k3eI_PDB header: immune systemChain: I: PDB Molecule: bovine antibody with ultralong cdr h3, heavy chain;PDBTitle: crystal structure of bovine antibody blv5b8 with ultralong cdr h3


Added to library: Sat Jun 22 08:27:28 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLRESGPSLVQPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSIDTGGSTGYNPGLKSRLSITK
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Known secondary structure (DSSP)
S
S
TTS
SS
TTTS
TTS

TT


TTTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNSKSQVSLSVSSVTTEDSATYYCTTVHQETRKTCSDGYIAVDSCGRGQSDGCVNDCNSCYYGWRNCRRQ
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Known secondary structure (DSSP) TTTT
S

GGG


TT
GGGGSSS
SSSS
T
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PAIHSYEFHVDAWGRGLLVTVSSASTTAPKVYPLSSCCSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVH
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Known secondary structure (DSSP)





SS

B






BSS

GGGTB
TT
 .........220.........230.........240.........250.........260.
Sequence TFPAVLQSSGLYSLSSMVTVPGSTSGQTFTCNVAHPASSTKVDKAVEPKSC
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Known secondary structure (DSSP)



TTS
GGGGGS
GGGT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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