Fold library entry viewer: c4k3aA_

Added to library: Sat Oct 5 08:36:10 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	D	D	L	F	V	P	V	S	N	F	D	P	K	S	I	F	P	E	I	K	H	P	F	E	P	M	Y	A	N	T	E	N	G	K	I	V	P	T	N	S	W	I	S	N	L	F	Y	P	S	A	D	N	L	A	P	T	T	P	D	P	Y	T	L	R	L	L	D	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B					S					G	G	G	T	S						S	S			T	T	B		T	T	S						S	S	S	T	T	G	G	G	G	S			G	G	G				B			S	S						S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	N	P	G	L	T	I	R	Q	P	S	A	K	V	L	G	S	Y	P	P	T	N	D	V	P	Y	T	D	A	G	Y	M	I	N	S	V	V	V	D	L	R	L	T	S	S	E	W	S	D	V	V	P	D	R	Q	V	T	D	W	D	H	L	S	A	N	L	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		S							S	S									S	S	S	S				S											S						G	G	G	T	T	S											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	P	Q	D	S	N	S	Y	I	D	F	P	I	V	R	G	M	A	Y	I	T	A	N	Y	N	N	L	T	P	Q	F	L	S	Q	H	A	I	I	S	V	E	A	D	E	K	K	S	D	D	N	T	S	T	F	S	G	R	K	F	K	I	T	M	N	D	D	P	T	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												T	T	B	S	S															S	S								T	T					S			S					S							S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	I	I	Y	S	L	G	D	K	P	L	E	L	R	K	Q	D	N	S	N	L	V	A	S	K	P	Y	T	G	V	I	R	V	A	K	L	P	A	P	E	F	E	T	L	L	D	A	S	R	A	V	W	P	T	G	G	D	I	S	A	R	S	D	D	N	N	G	A	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S									T	T					S	S													S	G	G	G							T	T	T														-		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	I	K	W	K	T	N	S	N	E	A	P	L	L	T	Y	A	Y	A	H	H	L	T	S	I	D	D	S	N	V	K	R	T	D	M	T	L	Q	S	A	T	K	G	P	M	T	A	L	V	G	N	E	W	T	L	R	E	T	E	L	S	P	V	E	W	L	P	L	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S	S	S														B		G	G	G											S	S	S									S														S	S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	P	N	P	T	T	I	N	E	I	M	T	E	I	N	K	D	I	A	S	N	Y	T	Q	E	T	A	K	E	D	N	Y	F	S	G	K	G	L	Q	K	F	A	M	L	A	L	I	L	N	K	S	D	Q	T	Q	L	R	N	P	E	L	A	Q	I	A	L	D	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			G	G	G													T	S							S		S	S																				T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	F	L	P	Y	L	Q	N	E	Q	A	D	P	F	R	Y	D	T	L	Y	K	G	I	V	A	K	A	G	L	P	T	S	M	G	G	T	D	D	L	S	A	E	F	G	H	S	Y	Y	S	D	H	H	Y	H	Q	G	Y	F	V	V	T	A	A	I	I	H	H	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S	S						T	T	T	T					S	T	T	S		G	G	G	T	S		S		T	T	G	G	G	G	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	T	W	N	A	D	R	L	K	A	W	T	E	A	L	I	R	D	V	N	N	A	N	D	G	D	E	Y	F	A	A	F	R	N	W	D	W	F	A	G	H	S	W	A	G	G	I	K	P	D	G	A	L	D	G	R	D	Q	E	S	V	P	E	S	V	N	F	Y	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T																	B			T	T	S	T	T	S		B	T	S	S			T	T	T	T									T	T			T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	K	L	W	G	L	A	T	G	N	T	P	L	T	K	L	A	S	L	Q	L	A	V	T	K	R	T	T	Y	E	Y	F	W	M	L	D	G	N	K	N	R	P	E	N	I	V	R	N	K	V	I	G	I	Y	F	E	Q	K	T	D	Y	T	T	Y	F	G	R	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T																							T	B			T	T		T	T	S						T	T	S	B						S	S				S	S		S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	I	H	G	I	Q	Q	L	P	M	T	P	E	L	M	E	Y	I	R	T	P	E	F	V	S	Q	E	W	D	E	K	L	G	A	I	A	P	T	V	Q	S	P	W	A	G	V	L	Y	L	N	Y	A	I	I	N	P	A	E	A	Y	P	A	L	R	K	V	Q	M	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G		S								T	T	S												T					G	G	G			S	T										T	T	T										T	T	S				T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Sequence	G	Q	T	R	S	Y	S	L	Y	L	T	A	T	R	P	H	F	F	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												T	S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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