Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k2bA_

Fold library idPDB HeaderMoleculeTitle
c4k2bA_PDB header: transferaseChain: A: PDB Molecule: ntd biosynthesis operon protein ntda;PDBTitle: crystal structure of ntda from bacillus subtilis in complex with the2 internal aldimine


Added to library: Sat Oct 19 08:39:46 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQVKISGKSKENMSLLKHLKGDVQGKELVIEDSIVNERWKQVLKEKIDIEHDLFNYQKNREISKVPFLPV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


STT

S
S
SSGGGTTGGGT

TT

TT


TT


S
B
S

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRLITNDEVEDILNTLTEVLPTGKFTSGPYLEQFEKVLSTYLHKRYVIATSSGTDAIMIGLLALGLNPGD
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) GGGS
T

SSST
SS
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVIMPANSFSATENAVLASGGVPIYVDINPQTFCIDPDKIEEAITPYTKFILPVHLYGKHSDMQHIRQIA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
SSS
TT


B
TTT
SB
GGGTGGG

TT

B
GGGB


 .........220.........230.........240.........250.........260.........270.........280
Sequence NRYKLKVIEDACQGIGLTDLGKYADITTLSFNPYNFGVCGKAGAIATDNEELAKKCIQFSYHGFEVNVKN
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) T

TT
TT
TTTTTT
S







SS

S
BTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KKVINFGFNSKMDNLQAAIGLERMKYLSLNNFKRLFLADRYITQLAELQNKGYIELPELSEDHVWHLFPI
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
SS


B
B

GGGTTTS
B




TTB

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KVRTEDRADIMTKLNEDFGVQTDVYYPILSHMQKTPLVQDKYAGLQLVHTEKAHSQVLHLPLYPSFTLEE
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

GGG
B

B
S
SS
GGGS
SSTT





TT

 .........430......
Sequence QDRVMEGLFHVIKQEI
Predicted secondary structure
SS confidence















Known secondary structure (DSSP)

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D