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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k25A_

Fold library idPDB HeaderMoleculeTitle
c4k25A_PDB header: biosynthetic proteinChain: A: PDB Molecule: probable trna threonylcarbamoyladenosine biosynthesisPDBTitle: crystal structure of yeast qri7 homodimer


Added to library: Sat May 11 08:24:45 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLDSTKAHIHHQARIGPLTERALIESNAREGIDLI
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Known secondary structure (DSSP)

SSS

BTTB







SSS
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence CVTRGPGXPGSLSGGLDFAKGLAVAWNKPLIGVHHXLGHLLIPRXGTNGKVPQFPFVSLLVSGGHTTFVL
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Known secondary structure (DSSP)
SSS
T


GGGTTTTS
SS
SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SRAIDDHEILCDTIDIAVGDSLDKCGRELGFKGTXIAREXEKFINQDINDQDFALKLEXNXLSFSFSAFI
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Known secondary structure (DSSP) SSSS
SS

T

SSSTTSSS
S
TT






S

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TALRTNLTKLGKTEIQELPEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQR
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Known secondary structure (DSSP) SS


TTTS

TTTTTT


SSGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LRTKLETELGTLNSTSFFNFYYPPXDLCSDNSIXIGWAGIEIWESLRLVSDLDICPIRQWPLNDLLSVDG
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Known secondary structure (DSSP) TTT
SSS






SS
ST

TT



TT

STTTTTSS
 .....
Sequence WRTDQ
Predicted secondary structure


SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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