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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4k1cA_

Fold library idPDB HeaderMoleculeTitle
c4k1cA_PDB header: membrane protein/metal transportChain: A: PDB Molecule: vacuolar calcium ion transporter;PDBTitle: vcx1 calcium/proton exchanger


Added to library: Sat May 11 08:35:51 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAWRAAVYDLQYILKASPLNFLLVFVPLGLIWGHFQLSHTLTFLFNFLAIIPLAAILANATEELADKAGN
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Known secondary structure (DSSP)
TTT
TTGGGGGT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTFNQTAAQT
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Known secondary structure (DSSP) GGGTTT
TTTSS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MSSLLAIACASLLIPAAFRATLPFIDGKILELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEEETDEVM
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Known secondary structure (DSSP) T



TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence STISRNPHHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSV
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Known secondary structure (DSSP) T






TSS

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVAMKDKMDLALGVAIGSSLQVALFVTPFMVLVGWMIDVPMTLNFSTFETATLFIAVFLSNYLILDGESN
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Known secondary structure (DSSP) TT
TTT



S




 .........360.........370....
Sequence WLEGVMSLAMYILIAMAFFYYPDE
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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