Fold library entry viewer: c4k0eA_

Added to library: Sat Oct 19 09:12:59 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	L	V	T	L	C	F	N	R	R	G	I	V	A	L	V	F	A	M	V	A	L	Y	G	W	Y	A	W	K	Q	L	P	L	E	A	Y	P	D	I	A	D	T	T	S	Q	V	V	T	Q	V	N	G	L	A	A	E	E	V	E	Q	Q	I	T	I	P	L	E	R	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																					T	S				S	S						S									S	S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	G	V	P	G	M	H	V	M	R	S	K	S	T	F	G	L	S	L	I	T	V	V	F	K	D	G	A	E	D	Y	W	S	R	Q	R	L	Q	E	R	I	N	G	V	S	L	P	Y	G	A	Q	P	S	L	D	P	L	T	S	P	I	G	E	I	Y	R	Y	T	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T										T	T										T	T															S	S				T	T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	K	T	R	D	L	R	E	L	S	E	L	Q	F	W	K	V	I	P	R	L	K	Q	V	A	G	V	V	D	V	A	N	F	G	G	L	T	T	Q	F	M	L	E	F	D	P	V	M	L	S	K	Y	N	I	S	L	N	Q	I	T	Q	A	I	S	E	N	N	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S												T								S	T	T									S																	T	T											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	G	S	I	L	N	R	G	E	Q	G	L	V	V	R	G	V	G	L	I	R	N	L	D	D	L	G	N	I	V	V	P	V	L	V	K	D	L	G	R	V	V	L	G	N	P	Q	R	H	G	I	L	G	M	D	R	N	P	D	T	I	Q	G	I	T	L	L	L	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T													S	S	G	G	G	T	T		B				B	T	T	T	S	S										S						T	T													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	N	P	S	V	V	M	E	G	V	H	A	A	V	R	D	L	N	D	N	I	L	P	K	D	V	K	V	V	P	Y	I	D	R	S	N	L	V	D	A	T	V	H	T	V	G	K	T	L	M	E	G	M	F	L	V	S	L	V	L	L	L	F	L	G	S	P	R	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																			T	T	S		T	T																																							S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	I	V	A	V	T	I	P	L	S	L	L	M	A	F	I	L	M	H	H	F	K	I	P	A	N	L	L	S	L	G	A	I	D	F	G	I	I	V	D	G	A	I	V	V	M	E	N	I	L	R	R	R	E	R	D	I	M	Q	S	V	L	Q	V	A	R	P	I	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																T	T					T	T	T	T	T			T	T	S	S	T	T																		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	M	I	V	I	I	T	A	Y	L	P	L	F	A	F	Q	R	I	E	Y	K	L	F	S	P	M	A	F	A	V	G	F	A	L	F	G	A	L	L	V	A	L	L	L	I	P	G	L	A	A	L	V	W	L	A	P	R	Y	E	S	V	L	N	R	L	V	G	S	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T																																			T	G	G	G				T	T	T											T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	A	I	G	I	A	V	A	T	L	V	G	V	M	I	L	G	A	T	I	G	R	D	F	L	P	Y	L	D	E	G	S	I	W	L	Q	V	T	L	P	P	G	I	S	L	E	K	A	G	Q	M	A	D	N	L	R	A	A	T	M	E	F	P	E	V	E	H	V	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S		B		S							S										S	S																		T	T	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	V	G	R	N	D	E	G	T	D	P	F	S	P	S	H	I	E	T	A	V	T	L	H	P	Y	S	T	W	T	S	G	R	D	K	Q	Q	L	I	E	A	M	A	T	R	F	R	D	L	P	G	T	Q	V	G	F	S	Q	P	M	I	D	G	V	L	D	K	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S		S				T	T											G	G	G			S																T	T	S	T	T																		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	H	S	D	L	V	V	K	V	Y	G	N	D	F	A	E	T	R	Q	V	A	T	A	I	T	R	L	L	K	T	V	P	G	A	Q	D	V	I	I	D	Q	E	P	P	L	P	Q	V	R	I	D	V	D	R	A	A	A	A	R	L	G	I	N	V	A	D	V	M	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S							S	S																	T	T	S	S	S							S	S																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	Q	T	G	I	G	G	S	P	V	T	Q	V	F	V	E	D	R	S	Y	N	V	V	A	R	F	I	G	S	S	R	N	D	P	E	A	I	G	N	L	T	L	T	A	A	N	G	A	H	V	A	L	A	Q	V	A	H	I	R	L	A	E	G	E	T	T	I	T	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T				S						T	T											G	G	G	G	S	S						T						T	T	S					G	G	G	T										S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	M	N	K	R	H	L	T	V	R	L	N	L	R	G	R	D	L	S	T	F	L	E	E	A	R	M	R	I	D	K	E	V	P	Y	D	R	T	H	I	Q	V	A	W	G	G	Q	F	E	N	Q	Q	R	A	Q	A	R	L	A	V	I	L	P	M	V	L	A	L	M	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												S	S									T	T	T										S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	L	F	G	E	F	K	N	L	R	Q	P	A	L	I	L	M	A	V	P	L	A	T	L	G	G	L	V	A	L	H	L	R	G	M	T	L	N	V	S	S	A	V	G	F	I	A	L	F	G	V	A	V	L	N	A	I	I	M	I	A	N	L	S	L	K	E	A	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		S	S								T	T															T	T			B	S																								T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.
Sequence	R	G	A	G	E	R	M	R	P	V	L	M	T	A	T	V	A	A	L	G	L	I	P	A	A	L	A	H	G	L	G	S	D	V	Q	R	P	L	A	T	V	V	V	G	G	L	I	T	A	T	A	L	T	L	V	L	L	P	A	L	Y	Y	L	I	E	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T																S	G	G	G				S	S	S		S	S	S																			T	T											T

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PDB structure

FASTA sequence

Hidden Markov model

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